Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0617 ATGGCTTCTCTTCTTCAACCTCATCGTCGTCTTCTTCCTCTACGACCATTATGTGTCATCTTCTTCCTCATTTTTCTTCTCTCCATTGTCAAACCTTCTCACCAACAATCCCCTAATAATGTCACCTACGCAATAAATCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATTGAAGCATTCTATCACTTCTGATCCCAGGAACTTCACCGCCAACTGGTACGGCTACCATGTCTGCAACTACACCGGCGTTTACTGTGCTCCGGCACCCGACGATCCCCATGTTTACACCGTCGCCGGCATCGACCTCAACCACGGTAATATCTCCGGTTCCTTGCCGGAAGACTTAGGTCTCCTCACCGACCTCGCTCTCTTCCACCTCAACTCTAACCGGTTCTGTGGGACCCTCCCTCAGAGCTTCCGTAATCTTCATCTTCTTCATGAGCTTGACGTCAGTAACAACCAGTTGTCCGGACCGTTCCCGGAAGTCCTTTTGTGCCTCCGTTCGTTGAAGTTCTTGGACATCAGGTTTAATTCGTTCGAAGGTAAGGTTCCTTCTCGCCTCTTTGATCTCAAGCTCGACGCTGTTTTCATAAACGACAACAAATTCCAGTTCTCGTTGCCGGAGAATCTCGGGAATTCTCCGGTGTCAGTGGTGGTTTTTGCGAACAATAATCTGAAGGGATGTCTTCCGTCGAGTTTGGGGAAGATGAAGGACACGCTTAACGAGATTATAATTTCGAACAGTGGGTTGAAAGGTTGTTTGCCGCAGGAGATTGGGAAATTGGATAAGGTTACGGTGTTTGATGTGAGTGGTAATAAGTTGGTCGGGACGTTGCCGGAATCTATTGAGGGAATGAAGAGGTTGGAGCAGTTGAATGTGGCTCATAATGAGCTCTCCGGCGAGATTCCGGCCAGTGTGTGCTCGTTGCCGAGGTTGCAGAACTTCACGTACTCCTTTAATTACTTCTGCAGCGAACCGCCTACCTGCCTGAAGTTGCCGGCGAAAGATGATCGGAAAAATTGCATTCCGTACCGGCCGATGCAGAGGTCGGAAAAGGAATGCGAAGCCTTTTATGCTCACCCAGTTGATTGTGGTGCCTATGGGTGCTCAAGGTCGCCGCCGCCGCCGCCGCCTCCATCTCCTCCTCCTCCATCACCCCCTCCGCCTCCTCCTCCTCCTCCTCCGGCGGTTCACCACTACTATCCGTGA 1215 0.5053 MASLLQPHRRLLPLRPLCVIFFLIFLLSIVKPSHQQSPNNVTYAINPRLIKAYYALQALKHSITSDPRNFTANWYGYHVCNYTGVYCAPAPDDPHVYTVAGIDLNHGNISGSLPEDLGLLTDLALFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPEVLLCLRSLKFLDIRFNSFEGKVPSRLFDLKLDAVFINDNKFQFSLPENLGNSPVSVVVFANNNLKGCLPSSLGKMKDTLNEIIISNSGLKGCLPQEIGKLDKVTVFDVSGNKLVGTLPESIEGMKRLEQLNVAHNELSGEIPASVCSLPRLQNFTYSFNYFCSEPPTCLKLPAKDDRKNCIPYRPMQRSEKECEAFYAHPVDCGAYGCSRSPPPPPPPSPPPPSPPPPPPPPPPAVHHYYP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0617 404 FunFam Leucine-rich repeat extensin-like protein 1 53 214 - -
Prci9g0617 404 Gene3D Ribonuclease Inhibitor 216 345 IPR032675 -
Prci9g0617 404 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 42 396 - -
Prci9g0617 404 Pfam Leucine rich repeat N-terminal domain 54 87 IPR013210 -
Prci9g0617 404 MobiDBLite consensus disorder prediction 371 404 - -
Prci9g0617 404 SUPERFAMILY L domain-like 53 335 - -
Prci9g0617 404 MobiDBLite consensus disorder prediction 372 404 - -
Prci9g0617 404 Pfam Leucine rich repeat 123 180 IPR001611 GO:0005515
Prci9g0617 404 Gene3D Ribonuclease Inhibitor 52 215 IPR032675 -
Prci9g0617 404 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0617 Prci-Chr9 20889531 20891082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0617 46 371 Leucine-rich Repeat extension Gene Families AT3G22800 67.890 1.12e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0617 - - gmx:100813811 566.614