Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0616 ATGGCAACAGCCCCGGCTTCAGCAGAAGGAGAAAAAATGTCTCTGAAAGATCAGGGCAATGAGTTTTTCAAGTCAGGGAAGTATCTCAAAGCGGCAGCACTTTACACCCAAGCCATCAAGCAAGACCCTTCAAACCCTACTCTTTATAGTAACCGTGCAGCTGCGCTGCTGCAACTGGACAAGCTTACAAAAGCTCTTGAGGATGCTGAGATGACAATAAAACTAAAACCTGAATGGGACAAGGGGCATTTTAGGAAAGGATGTGTACTTGAGGCCATGAAACGATATGAAGATGCCTTAGCTGCCTTTAAGATGGCTATGCAGTATAATCCCCAAAGCCAAGAAGTTTCAAAAAAGATAAGGAGGATAAACCAACTAGCAAAAGATAGAGATCGAGCACAAGAAGTGGAGAATAAAAGATCTAATGTTGACATGACTAAGCATCTAAATACATTGAAACCTGAATTGTCTGGAAAGTATGGATGTGAAGACAGCTGGAAAGACTTGTTTTCTTTCCTTGTTGAGACCATGGAGACAGCTGTAAAATCATGGCATGGAACTTCCACTGTGGATGCTAGAGTCTACTTCCTTCTTGATATGGAAAAGACACAGACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACACATGGAAGCTGTTTTTCATTTCTCAGGCAATATGCTGAGGACTCCTTTTCCAGAGCAGCCTGCTTAATTGTTCCCAAAAGCATAATTGCTTATCCGCAGGTCTGGAAGGGCCAGGGATCAAGGAGATGGAAACATGGTCAGAATGATGGTTTTTTTGTTCAATTTGAATCACCCTCACTTAGAAAGCTGTGGTTTATTCCTAGTTCCAATGAAATGGGACAAACATTATGCAGAGACCCAGAAGTCTTGGACATTGGTGCTCATGAAATTCTTCCACGCCTGTTCAAAGAAAAGCTGCCTAGTTCTTAG 978 0.4192 MATAPASAEGEKMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLTKALEDAEMTIKLKPEWDKGHFRKGCVLEAMKRYEDALAAFKMAMQYNPQSQEVSKKIRRINQLAKDRDRAQEVENKRSNVDMTKHLNTLKPELSGKYGCEDSWKDLFSFLVETMETAVKSWHGTSTVDARVYFLLDMEKTQTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLIVPKSIIAYPQVWKGQGSRRWKHGQNDGFFVQFESPSLRKLWFIPSSNEMGQTLCRDPEVLDIGAHEILPRLFKEKLPSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0616 325 Gene3D Tetratricopeptide repeat domain 11 126 IPR011990 GO:0005515
Prci9g0616 325 SUPERFAMILY TPR-like 14 123 IPR011990 GO:0005515
Prci9g0616 325 SMART tpr_5 12 45 IPR019734 GO:0005515
Prci9g0616 325 SMART tpr_5 46 79 IPR019734 GO:0005515
Prci9g0616 325 SMART tpr_5 80 113 IPR019734 GO:0005515
Prci9g0616 325 ProSiteProfiles TPR repeat profile. 12 45 IPR019734 GO:0005515
Prci9g0616 325 Pfam Tetratricopeptide repeat 82 112 IPR013105 -
Prci9g0616 325 Pfam TPR repeat 19 59 - -
Prci9g0616 325 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Prci9g0616 325 FunFam serine/threonine-protein phosphatase 5 11 125 - -
Prci9g0616 325 Coils Coil 52 72 - -
Prci9g0616 325 PANTHER TPR REPEAT CONTAINING PROTEIN 5 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0616 1 107 U-box Gene Family AT3G07370 31.776 3.07e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0616 - - gmx:100775252 563.918