Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0595 ATGAATCGTCGAGTGAAGGAGGAGATTGTGGAGTCAAGTATGGCTGCTCCTCTGCCGCAGCCAATGGAAGGGCTCCACGAAGCTGGTCCTCCGCCGTTTCTGACAAAAACATACGACATCGTCGACGATGCTTCCACCAACCACATCGTTTCGTGGAGCCGTGGTAACAATAGCTTCGTTGTCTGGGATCCACAGTCCTTCTCCATGAGCCTCCTTCCTAGATTCTTCAAACACAACAATTTCTCCAGCTTCGTCAGACAGCTTAACACCTATGGATTCAGAAAGGTTGATCCAGATAGGTGGGAATTTGCCAATGAAGGATTTCTCAGAGGACAAAAGCATCTTCTGAAGAACATAAGGAGAAGGAAAACACCTCAACATCATCATCCAGCTCTCCTACACCAACAAGCCCTAGATCCATGTGTGGAAGTAGGCCGGTTTGGACTCGACGGAGAGATCAACCGGCTCAGGCGAGACAAGCAGGTGCTCATGCTAGAACTGGTGAAACTCAGACAACAACAACAGAATACCAAAACCTACCTTCAACAAATGGAAGGTAGGCTCAAGAGAACTGAACAGAAGCAACAACAGATGATGAACTTCTTAGCAAGAGCAATGCAAAACCCTAACTTCGTCCAGCAATTAGTTCAGCAGAAAGAATGGAAGAAGGAGCTTGAAGAAGCAATTTCAAAGAAGAGAAGAAGAACTATAGATCAAGGACCTAGTAGTCATGATAATAATGATAATCTTGAGTTATTAGGTCAATTAGAATCCTCAGACTTCGTTGAAGAACTTGAGACTGATATTATTACTGATCCTGCTGATCATGATGTTGCTGATGAGGATTTGGATTTGATTAAGAAGTTAGAGGAAGAAGATCAACATGCACAACAATTAAATCAACATGATGATGATGATGAGGTCATCCTGGTTGGAAGTGAATGTATTATTAATGGAGAGTCGACACAGATTGACGATGAAGTGTTTTGGCAAGACTTGTTGAACGAGGATGTTGAAGAAGTTATACAAGGTTTCGAGGAAGATGTTGAAGTGTTGGCCGAACAAGTTGGTTATTTAGCCTCTGATCATCATAAGTAA 1098 0.4299 MNRRVKEEIVESSMAAPLPQPMEGLHEAGPPPFLTKTYDIVDDASTNHIVSWSRGNNSFVVWDPQSFSMSLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNIRRRKTPQHHHPALLHQQALDPCVEVGRFGLDGEINRLRRDKQVLMLELVKLRQQQQNTKTYLQQMEGRLKRTEQKQQQMMNFLARAMQNPNFVQQLVQQKEWKKELEEAISKKRRRTIDQGPSSHDNNDNLELLGQLESSDFVEELETDIITDPADHDVADEDLDLIKKLEEEDQHAQQLNQHDDDDEVILVGSECIINGESTQIDDEVFWQDLLNEDVEEVIQGFEEDVEVLAEQVGYLASDHHK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0595 365 Coils Coil 153 173 - -
Prci9g0595 365 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0595 365 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0595 365 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0595 365 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0595 365 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0595 365 Gene3D - 25 123 IPR036388 -
Prci9g0595 365 SUPERFAMILY "Winged helix" DNA-binding domain 29 122 IPR036390 -
Prci9g0595 365 FunFam Heat shock transcription factor 1 26 123 - -
Prci9g0595 365 Coils Coil 335 355 - -
Prci9g0595 365 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 257 IPR027725 -
Prci9g0595 365 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0595 Prci-Chr9 20637586 20640462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0595 5 364 HSF AT3G22830 53.747 1.47e-133 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci9g0595 HSF_DNA-bind 4.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0595 K09419 - qsu:112016413 421.009