Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0590 ATGAAGCTTCTTAAGTCTGAGGAAACCGCCTCTGAGGCTTGCGACTTTCCGGAGGAAACCCAAGAAGACAAACCCTCGGGTTCTTCTGTGGTTGAAGGCAATGACCGTGGTCTTGATAATGGTGATGCGGTTCTCGATGTCTTTGGGAAAACCGTGGAGTTCCCGGTATTAGAGAACGCTGAAGACTCTGTGGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGTCTTGCTCGGTTGAAGACATTGAAGTTCTTTGGGAATGAGATCAATTTGTTTGCGCCGGAGTTCGGAAACTTGACGGGCTTGGAGTGCTTGCAGATGAAGATATCTTCGCCTGGGATTGGTGGGTTGCCATTGCAAAAGTTGAAGGGTTTGAAGGAGCTAGAGTTGTCCAAAGTGCCTCCGCGGCCTTCTGCGTTCCCTATATTGACTGAGGTTGCCGGTCTTGATTCCTTGACCAAGCTATCCATTTGCCACTTTTCTATAAGATACCTTCCTCCTGAAATTGGCCTCTTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCCTCTGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCCTCTCTGTCAGGGCTTGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAGCTAGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGCAACATGCTTCAGATACCTTCATGGATTTGCTGTAATATGGAAGGAAATGACAAAGGTGAAAGCAGTGATGATTTTAGCAGTTCTTCTGTAGAAATGGATGTCAATGAAACTAGTTCACTAGAGAATGATGGACTACTTTCACATGCACCTCGTAATAGCTCATCAAGCCTATTAACCAGCTCTTCATCCAGCAGTAGATGTTTTGCAACCCATAAATCAGGTAAAAGGTGGAAGCGGCAGCGCTACTTACAGCAGAAAGCCCGACAGGAATGCTTAAACAATAGCAGGAAGTGGAAAGGTTTAAATAAATCACAGCCGATCGAGATGTCTGGAATTTGTGAATCAGAAAACAAAGGCAGTCTTGCTCTTGAAAACTGCAGAGAAGCTCCACCAGACAGTGCGGGTCTGGATGATGAAGCTAAAAGGATGGTCTCAGAGGAAACTGGGAATGAAAATGTAATTGATGTTAACAATAACGAAGTGGGTATTGAGAAGCAGTTTTCTAAGGATTGCTGTTCTAGTAAAAGTGAAGATGAAAAAGATGCGTCCCTTTGCCCCTTGGAGAATGGACCTAGTGGGCAGGACAATGTATCAAGTTCAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGAGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCTTTGTCTTACAAGTATAGTAGATTATCATTTTGTGGCACTGAAGACCATATGCCAGATGGCTTTTATGATGCTGGACGTGATCAACCTTTTATGTCCCTTGAGAGTTATGAGCAAAATCATTGTCTTGCCTCTCGTGAAGTCATCTTGTTGGACAGAGAAAAAGATGAAGAACTGGATGCCATCACACTCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATGTTGCCAAACATGGGAACAAAGCTGCTCTTGACAGCTTTCAGGTTGCTTCATTTCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAATGATAGAGGTGCTATTGTTGAAAGGACACGAAAATCAGTTTCTGGTTCAAACTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAGCAGTGATGTTAGTGCTTCTTCTAAACTAGTTGTAAACAGTGCAGAAGACATTACTCTTACTAATATCTGTGAAAAATCTCTCGAGTCCATAAAAAGAAGACGAAGTTCTATCATAGTTCCCATTGGATCTGTGCAGTTTGGCGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAACCTCCCATACCTTGTGAGCTTGTTAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACACCATTGTGGTTAATAGAGGTGATACCCAGGTTAGAATGTTAGTTGATGCATGCCGGCCACATGACATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAGTTCCTATTTCACCTGATGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACATGTGATGAATTTGAGAAGGCTTCTTCAAGTACCTTAGTTCGGTGTAAATTTGGTTCAATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCGCCAGACAAAGTAAAAAACTTTGAATATAATTGTTTGGGAGAAGTGAGAATCCTAGGTGCTCTGAAACACCCCTGTATAGTTGAAATGTATGGACACCAAATATCTTACAAGTGGACTCTTTCGGAGGATGGTAAACCTGAGCATTGCTTATTAAGGTCTGCAATTTTTATGGAGTACATAGAAGGGGGCTCTTTAAGAACCTATCTTGACAAGTTATCAAAAGCTGGAGAAAAGCATGTTCCAGTGGAGTTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCGAAACACATAATTCATCGTGACATAAAAAGTGAGAACATTCTGATTGCTTTGGAAAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGATAGTGCGGTGCCACTTAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGAACACCTCCTCCTTATGTATGCACTGGAACACCACGATGGATGGCTCCAGAGGTTATGCGAACTATGTATAAAGAAAATACTTATGGACTGGAAGCTGATATCTGGTCATTTGGATGCTTGCTTCTGGAACTTCTCACGCTTCGTATTCCATATTCTGGGCTACCTGATTTACAATTCCATGACATTTTACAGATGGGTAAACCACCACAGTTAACTGAAGAACTGGAGGCCCTGTGTTCGCTAAACGAACCCACAATGATTCAATCCAGTGATGAGCCGGAAAAATCAGATACTGAAGTAGACACGATGAAATTCCTTGTTGATTTGTTTCGTAAGTGTGTGGAAGAAAATCCAGCCAAACGGCCTACAGCAAAAGAAATCTATGAAATGCTTCTTGAACAAACAGGCCGTCTAAAAGTTGAAGATGTTAGGAAGAGTTAG 3351 0.4178 MKLLKSEETASEACDFPEETQEDKPSGSSVVEGNDRGLDNGDAVLDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGIGGLPLQKLKGLKELELSKVPPRPSAFPILTEVAGLDSLTKLSICHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLRNMLQIPSWICCNMEGNDKGESSDDFSSSSVEMDVNETSSLENDGLLSHAPRNSSSSLLTSSSSSSRCFATHKSGKRWKRQRYLQQKARQECLNNSRKWKGLNKSQPIEMSGICESENKGSLALENCREAPPDSAGLDDEAKRMVSEETGNENVIDVNNNEVGIEKQFSKDCCSSKSEDEKDASLCPLENGPSGQDNVSSSESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTEDHMPDGFYDAGRDQPFMSLESYEQNHCLASREVILLDREKDEELDAITLSAQSLVFHLKQLNDVAKHGNKAALDSFQVASFLALFVSDHFGGNDRGAIVERTRKSVSGSNYHKPFVCTCSTGSSSDVSASSKLVVNSAEDITLTNICEKSLESIKRRRSSIIVPIGSVQFGVCRHRALLLKYLCDRMEPPIPCELVRGFLDFSPHAWNTIVVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLSRTKVPISPDGTPGPGCSFPSLSTCDEFEKASSSTLVRCKFGSIEAAAKVRTLEVKESSPDKVKNFEYNCLGEVRILGALKHPCIVEMYGHQISYKWTLSEDGKPEHCLLRSAIFMEYIEGGSLRTYLDKLSKAGEKHVPVELAFYIAKDVACALSELHSKHIIHRDIKSENILIALERKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEADIWSFGCLLLELLTLRIPYSGLPDLQFHDILQMGKPPQLTEELEALCSLNEPTMIQSSDEPEKSDTEVDTMKFLVDLFRKCVEENPAKRPTAKEIYEMLLEQTGRLKVEDVRKS 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0590 1116 SMART serkin_6 780 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0590 1116 SMART LRR_typ_2 226 249 IPR003591 -
Prci9g0590 1116 SMART LRR_typ_2 180 203 IPR003591 -
Prci9g0590 1116 SMART LRR_typ_2 84 106 IPR003591 -
Prci9g0590 1116 SMART LRR_typ_2 250 276 IPR003591 -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 286 330 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 284 330 - -
Prci9g0590 1116 Gene3D Transferase(Phosphotransferase) domain 1 783 1115 - -
Prci9g0590 1116 FunFam Leucine-rich repeat protein kinase family protein 53 296 - -
Prci9g0590 1116 SMART LRR_bac_2 226 245 - -
Prci9g0590 1116 SMART LRR_bac_2 180 199 - -
Prci9g0590 1116 SMART LRR_bac_2 203 222 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 392 414 - -
Prci9g0590 1116 PRINTS Leucine-rich repeat signature 183 196 - -
Prci9g0590 1116 PRINTS Leucine-rich repeat signature 226 239 - -
Prci9g0590 1116 ProSiteProfiles Protein kinase domain profile. 788 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0590 1116 Pfam Protein kinase domain 813 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0590 1116 SUPERFAMILY RNI-like 67 266 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 1 36 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 453 467 - -
Prci9g0590 1116 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Prci9g0590 1116 SUPERFAMILY Protein kinase-like (PK-like) 793 1101 IPR011009 -
Prci9g0590 1116 Pfam Ethylene-responsive protein kinase Le-CTR1 654 736 - -
Prci9g0590 1116 Pfam Leucine rich repeat 206 263 IPR001611 GO:0005515
Prci9g0590 1116 MobiDBLite consensus disorder prediction 395 412 - -
Prci9g0590 1116 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Prci9g0590 1116 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1105 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 468 489 - -
Prci9g0590 1116 Gene3D Ribonuclease Inhibitor 48 287 IPR032675 -
Prci9g0590 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Prci9g0590 1116 MobiDBLite consensus disorder prediction 1 22 - -
Prci9g0590 1116 SMART LRR_sd22_2 250 271 - -
Prci9g0590 1116 SMART LRR_sd22_2 180 205 - -
Prci9g0590 1116 SMART LRR_sd22_2 226 247 - -
Prci9g0590 1116 FunFam Leucine-rich repeat protein kinase family protein 826 1107 - -
Prci9g0590 1116 MobiDBLite consensus disorder prediction 446 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0590 Prci-Chr9 20571218 20583414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0590 786 1101 MAP Kinase Kinase Kinase AT2G24360 27.848 2.22e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Prci9g0590 Pkinase 6.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0590 - - gmx:100811118 1526.53