Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0589 ATGAAGCTTCTTAAGTCTGAGGAAACCGCCTCTGAGGCTTGCGACTTTCCGGAGGAAACCCAAGAAGACAAACCCTCGGGTTCTTCTGTGGTTGAAGGCAATGACCGTGGTCTTGATAATGGTGATGCGGTTCTCGATGTCTTTGGGAAAACCGTGGAGTTCCCGGTATTAGAGAACGCTGAAGACTCTGTGGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGTCTTGCTCGGTTGAAGACATTGAAGTTCTTTGGGAATGAGATCAATTTGTTTGCGCCGGAGTTCGGAAACTTGACGGGCTTGGAGTGCTTGCAGATGAAGATATCTTCGCCTGGGATTGGTGGGTTGCCATTGCAAAAGTTGAAGGGTTTGAAGGAGCTAGAGTTGTCCAAAGTGCCTCCGCGGCCTTCTGCGTTCCCTATATTGACTGAGGTTGCCGGTCTTGATTCCTTGACCAAGCTATCCATTTGCCACTTTTCTATAAGATACCTTCCTCCTGAAATTGGCCTCTTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCCTCTGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCCTCTCTGTCAGGGCTTGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAGCTAGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGATACCTTCATGGATTTGCTGTAATATGGAAGGAAATGACAAAGGTGAAAGCAGTGATGATTTTAGCAGTTCTTCTGTAGAAATGGATGTCAATGAAACTAGTTCACTAGAGAATGATGGACTACTTTCACATGCACCTCGTAATAGCTCATCAAGCCTATTAACCAGCTCTTCATCCAGCAGTAGATGTTTTGCAACCCATAAATCAGGTAAAAGGTGGAAGCGGCAGCGCTACTTACAGCAGAAAGCCCGACAGGAATGCTTAAACAATAGCAGGAAGTGGAAAGGTTTAAATAAATCACAGCCGATCGAGATGTCTGGAATTTGTGAATCAGAAAACAAAGGCAGTCTTGCTCTTGAAAACTGCAGAGAAGCTCCACCAGACAGTGCGGGTCTGGATGATGAAGCTAAAAGGATGGTCTCAGAGGAAACTGGGAATGAAAATGTAATTGATGTTAACAATAACGAAGTGGGTATTGAGAAGCAGTTTTCTAAGGATTGCTGTTCTAGTAAAAGTGAAGATGAAAAAGATGCGTCCCTTTGCCCCTTGGAGAATGGACCTAGTGGGCAGGACAATGTATCAAGTTCAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGAGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCTTTGTCTTACAAGTATAGTAGATTATCATTTTGTGGCACTGAAGACCATATGCCAGATGGCTTTTATGATGCTGGACGTGATCAACCTTTTATGTCCCTTGAGAGTTATGAGCAAAATCATTGTCTTGCCTCTCGTGAAGTCATCTTGTTGGACAGAGAAAAAGATGAAGAACTGGATGCCATCACACTCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATGTTGCCAAACATGGGAACAAAGCTGCTCTTGACAGCTTTCAGGTTGCTTCATTTCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAATGATAGAGGTGCTATTGTTGAAAGGACACGAAAATCAGTTTCTGGTTCAAACTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAGCAGTGATGTTAGTGCTTCTTCTAAACTAGTTGTAAACAGTGCAGAAGACATTACTCTTACTAATATCTGTGAAAAATCTCTCGAGTCCATAAAAAGAAGACGAAGTTCTATCATAGTTCCCATTGGATCTGTGCAGTTTGGCGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAACCTCCCATACCTTGTGAGCTTGTTAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACACCATTGTGGTTAATAGAGGTGATACCCAGGTTAGAATGTTAGTTGATGCATGCCGGCCACATGACATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAGTTCCTATTTCACCTGATGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACATGTGATGAATTTGAGAAGGCTTCTTCAAGTACCTTAGTTCGGTGTAAATTTGGTTCAATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCGCCAGACAAAGTAAAAAACTTTGAATATAATTGTTTGGGAGAAGTGAGAATCCTAGGTGCTCTGAAACACCCCTGTATAGTTGAAATGTATGGACACCAAATATCTTACAAGTGGACTCTTTCGGAGGATGGTAAACCTGAGCATTGCTTATTAAGGTCTGCAATTTTTATGGAGTACATAGAAGGGGGCTCTTTAAGAACCTATCTTGACAAGTTATCAAAAGCTGGAGAAAAGCATGTTCCAGTGGAGTTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCGAAACACATAATTCATCGTGACATAAAAAGTGAGAACATTCTGATTGCTTTGGAAAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGATAGTGCGGTGCCACTTAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGAACACCTCCTCCTTATGTATGCACTGGAACACCACGATGGATGGCTCCAGAGGTTATGCGAACTATGTATAAAGAAAATACTTATGGACTGGAAGCTGATATCTGGTCATTTGGATGCTTGCTTCTGGAACTTCTCACGCTTCGTATTCCATATTCTGGGCTACCTGATTTACAATTCCATGACATTTTACAGATGGGTAAACCACCACAGTTAACTGAAGAACTGGAGGCCCTGTGTTCGCTAAACGAACCCACAATGATTCAATCCAGTGATGAGCCGGAAAAATCAGATACTGAAGTAGACACGATGAAATTCCTTGTTGATTTGTTTCGTAAGTGTGTGGAAGAAAATCCAGCCAAACGGCCTACAGCAAAAGAAATCTATGAAATGCTTCTTGAACAAACAGGCCGTCTAAAAGTTGAAGATGTTAGGAAGAGTTAG 3324 0.4176 MKLLKSEETASEACDFPEETQEDKPSGSSVVEGNDRGLDNGDAVLDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGIGGLPLQKLKGLKELELSKVPPRPSAFPILTEVAGLDSLTKLSICHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQIPSWICCNMEGNDKGESSDDFSSSSVEMDVNETSSLENDGLLSHAPRNSSSSLLTSSSSSSRCFATHKSGKRWKRQRYLQQKARQECLNNSRKWKGLNKSQPIEMSGICESENKGSLALENCREAPPDSAGLDDEAKRMVSEETGNENVIDVNNNEVGIEKQFSKDCCSSKSEDEKDASLCPLENGPSGQDNVSSSESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTEDHMPDGFYDAGRDQPFMSLESYEQNHCLASREVILLDREKDEELDAITLSAQSLVFHLKQLNDVAKHGNKAALDSFQVASFLALFVSDHFGGNDRGAIVERTRKSVSGSNYHKPFVCTCSTGSSSDVSASSKLVVNSAEDITLTNICEKSLESIKRRRSSIIVPIGSVQFGVCRHRALLLKYLCDRMEPPIPCELVRGFLDFSPHAWNTIVVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLSRTKVPISPDGTPGPGCSFPSLSTCDEFEKASSSTLVRCKFGSIEAAAKVRTLEVKESSPDKVKNFEYNCLGEVRILGALKHPCIVEMYGHQISYKWTLSEDGKPEHCLLRSAIFMEYIEGGSLRTYLDKLSKAGEKHVPVELAFYIAKDVACALSELHSKHIIHRDIKSENILIALERKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEADIWSFGCLLLELLTLRIPYSGLPDLQFHDILQMGKPPQLTEELEALCSLNEPTMIQSSDEPEKSDTEVDTMKFLVDLFRKCVEENPAKRPTAKEIYEMLLEQTGRLKVEDVRKS 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0589 1107 Pfam Ethylene-responsive protein kinase Le-CTR1 645 727 - -
Prci9g0589 1107 ProSiteProfiles Protein kinase domain profile. 779 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0589 1107 SMART serkin_6 771 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0589 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Prci9g0589 1107 MobiDBLite consensus disorder prediction 437 488 - -
Prci9g0589 1107 SMART LRR_bac_2 226 245 - -
Prci9g0589 1107 SMART LRR_bac_2 180 199 - -
Prci9g0589 1107 SMART LRR_bac_2 203 222 - -
Prci9g0589 1107 SMART LRR_sd22_2 180 205 - -
Prci9g0589 1107 SMART LRR_sd22_2 226 247 - -
Prci9g0589 1107 MobiDBLite consensus disorder prediction 444 458 - -
Prci9g0589 1107 MobiDBLite consensus disorder prediction 1 36 - -
Prci9g0589 1107 SUPERFAMILY RNI-like 67 259 - -
Prci9g0589 1107 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Prci9g0589 1107 MobiDBLite consensus disorder prediction 277 322 - -
Prci9g0589 1107 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Prci9g0589 1107 SMART LRR_typ_2 226 249 IPR003591 -
Prci9g0589 1107 SMART LRR_typ_2 180 203 IPR003591 -
Prci9g0589 1107 SMART LRR_typ_2 84 106 IPR003591 -
Prci9g0589 1107 Pfam Leucine rich repeat 159 216 IPR001611 GO:0005515
Prci9g0589 1107 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1096 - -
Prci9g0589 1107 FunFam Leucine-rich repeat protein kinase family protein 817 1098 - -
Prci9g0589 1107 PRINTS Leucine-rich repeat signature 226 239 - -
Prci9g0589 1107 PRINTS Leucine-rich repeat signature 183 196 - -
Prci9g0589 1107 Pfam Protein kinase domain 804 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0589 1107 MobiDBLite consensus disorder prediction 274 322 - -
Prci9g0589 1107 MobiDBLite consensus disorder prediction 459 480 - -
Prci9g0589 1107 MobiDBLite consensus disorder prediction 1 22 - -
Prci9g0589 1107 Gene3D Transferase(Phosphotransferase) domain 1 774 1106 - -
Prci9g0589 1107 SUPERFAMILY Protein kinase-like (PK-like) 784 1092 IPR011009 -
Prci9g0589 1107 Gene3D Ribonuclease Inhibitor 48 279 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0589 Prci-Chr9 20571218 20583414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0589 777 1092 MAP Kinase Kinase Kinase AT2G24360 27.848 2.29e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Prci9g0589 Pkinase 6.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0589 - - gmx:100811118 1519.21