Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0588 ATGCCGGTGAGGCAAATGAAAGAAAGCTCGGAGCAGCATCTTGTGATCAAAACCCACTTGCAGAACTCCATAAATCCAGCGAAGAAAGCACCCAAAACAGTCCAAAATGGCAAAGGTCCCCCGCCTCAAGAACCTCACAACGCTAAACCCCATAGCCAGAGCCAACCTCCGCCTCCGGCGAAGAACAGAGGAAGAAGAAGGAGTCGGGGAGGCCGAAAGTCCGATCAAGGCGATGCGATGCGACCTGCTTGTCGACCCTGCACTGTGGCTAATAAACCGCTATCAGGAAACCCGGGTCAAATTTTGGTATCAAGTACTGTAAATGGATCTGTTGAAAATGGCGGCAACAACTCTTGTGATGTTGCGATGGGGTTTCCTACCTCAAGTAAATCTTTGAGCTTTGCTCAAAGACCCGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCCGAAGTGTCATCTAGAACAGTAAACAGGGCCATCATGGCGGAACTTGTGAGACTGTACAAAGAGTCTGACTTAGGGATGAGACTCCCTGCTTATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGAAAGCGCGCTGATGCTCCCCAGGAGGCACTTCAGATTCTTGATATTGTACTAAGAGAGCTATCAACGAAGAGGTTTTGCCCCATCGGGAGGTCCTTCTTTTCACCTGATATCAGGACTCCTCAAAGGCTGGGAGAGGGATTGGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCTGCTGCATTTATTGAGCCTCTTCCAGTAGTGGAATTTGTCGGCCAGCTGTTAGGGAAAGACGTGTTGTCAAGGCCATTGTATGACGCCGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAGGTAACACACAGAGGGAGTGTGCGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTATTTCCAAGAGATGTATGGTTTCACCATTCAGTATACTCACCTACCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATTTGCCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACGAAAAGGCTGAATGAGAAGCAAATTACTGCCTTGCTGAAAGTTACTTGCCAGAGACCCCGGGATCGGGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCAAGATCCTTATGCAAAGGAATTTGGGATTAAGATCAGTGAAAAACTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGCTGAAATATCATGACACTGGGAAAGAAAAGAACTGCTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTTAGCCGTTGGGCATGCATAAACTTTTCACGAAACGTGCAAGATAGTGTTGCTCGCAGTTTTTGTTGTGAACTTGCTCAGATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAATGCCAAGCCTGAGCAGGTGGAGAAGGCTTTGAAGCATGTTTTTCATGTTTCAATGAACAAAACTAAGGGAAAGGAATTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGGTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACCGACCTTGGTTTAATTTCCCAATGCTGCCTGACGAAGCATGTCTTTAAGATCACTAAACAATATCTGGCTAATGTGTCCCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTTGATGCTATAAGCTGCAGAATACCATTGGTCAGTGACATTCCAACCATAATATTTGGAGCAGATGTCACACACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCCTCCCAAGACTGGCCTGAGGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTCATTCAAGATCTGTACAAAACTTGGCATGACCCTGTTCGTGGCGTAGTTAGTGGTGGCATGATCCGAGACTTGTTGATTGCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATAATATTTTACAGGGATGGCGTGAGTGAAGGGCAATTTTATCAAGTTCTGCTTTATGAGTTAGATGCAATCCGGAAGGCATGTGCTTCCTTAGAGCCAAACTATCAGCCTCCAGTAACCTTTATTGTTGTACAAAAAAGACACCACACTAGGTTGTTTGCGAACAACCACAGGGACAAGGGCAGCACAGATAAGAGTGGGAATATACTGCCTGGGACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGTATTCAGGGCACGAGTCGGCCGGCTCATTATCATGTCCTATGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTGACAAACAATCTGTGTTATACATATGCTAGGTGTACACGTTCTGTATCTGTTGTTCCTCCAGCATATTATGCGCATCTAGCAGCATTTCGGGCGCGTTTTTATATGGAGCCAGACTTGCAGGAGAATGGCTCTACCGGCGGTGGTAGCGCTTGTCATGGTTCCAAAGCAACGCGTGCAGCTGGAGAATGTGGGGTCCGGCCATTGCCAGCCCTGAAAGAAAACGTGAAGAGGGTAATGTTTTATTGTTAG 2994 0.4482 MPVRQMKESSEQHLVIKTHLQNSINPAKKAPKTVQNGKGPPPQEPHNAKPHSQSQPPPPAKNRGRRRSRGGRKSDQGDVXMRPACRPCTVANKPLSGNPGQILVSSTVNGSVENGGNNSCDVAMGFPTSSKSLSFAQRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLYDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCCELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVFHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGVVSGGMIRDLLIAFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKGSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSTGGGSACHGSKATRAAGECGVRPLPALKENVKRVMFYC 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0588 998 SMART DUF1785_2 290 342 IPR014811 -
Prci9g0588 998 Pfam N-terminal domain of argonaute 147 281 IPR032474 -
Prci9g0588 998 CDD PAZ_argonaute_like 342 456 - -
Prci9g0588 998 FunFam protein argonaute 10-like 700 998 - -
Prci9g0588 998 ProSiteProfiles Piwi domain profile. 631 952 IPR003165 GO:0003676
Prci9g0588 998 Pfam Argonaute linker 2 domain 483 529 IPR032472 -
Prci9g0588 998 Gene3D paz domain 336 461 - -
Prci9g0588 998 Pfam Piwi domain 632 951 IPR003165 GO:0003676
Prci9g0588 998 FunFam Protein argonaute-2 336 462 - -
Prci9g0588 998 MobiDBLite consensus disorder prediction 43 57 - -
Prci9g0588 998 Pfam Argonaute linker 1 domain 291 340 IPR014811 -
Prci9g0588 998 SMART PAZ_2_a_3 347 479 IPR003100 GO:0005515
Prci9g0588 998 Gene3D - 521 694 - -
Prci9g0588 998 Pfam Mid domain of argonaute 540 616 IPR032473 -
Prci9g0588 998 SMART Piwi_a_2 631 952 IPR003165 GO:0003676
Prci9g0588 998 Gene3D - 700 998 IPR036397 GO:0003676
Prci9g0588 998 MobiDBLite consensus disorder prediction 1 96 - -
Prci9g0588 998 MobiDBLite consensus disorder prediction 15 30 - -
Prci9g0588 998 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 953 - -
Prci9g0588 998 ProSiteProfiles PAZ domain profile. 343 457 IPR003100 GO:0005515
Prci9g0588 998 SUPERFAMILY PAZ domain 337 497 IPR036085 GO:0005515
Prci9g0588 998 FunFam Argonaute 10 521 694 - -
Prci9g0588 998 CDD Piwi_ago-like 501 951 IPR045246 -
Prci9g0588 998 SUPERFAMILY Ribonuclease H-like 621 953 IPR012337 -
Prci9g0588 998 Pfam PAZ domain 369 473 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0588 Prci-Chr9 20533454 20543902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0588 1 998 Eukaryotic Initiation Factors Gene Family AT5G43810 81.430 0.0 1662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0588 K11593 - cave:132176966 1846.63