Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0587 ATGAAGATGGGTAGGAATCATATAATTCTTCGCCGTCGTGTTGAGTCTTGCAAATCCAGGTACTCAACTATTGATGAAATCGTGAACCATCTTCGCTCAAATTACCCTGATTATCGGCGAACGAGGCAGCAAGTTTTGACTCGATCTGTTCAAGAAGCTTTGGAGTCATTTAAGCGTGGGAACAAGCAATCAAACAAAAGGCCTAGCACTTCCATTTTTAAGTATGATACATCAGAAGATGACAATGAAGAAGAGAGTCGGAGTGCATCTCAAAAGAGGCGTAAGAAAAATAATGAGAGTGAAGAAAAGTTGCAAAAAATGGAGACTTTACACCTTAGAAAGTTACGGAGGGATCAGGGTCATGCATCAATCTCTTCTTCTTCAACTTCTAGTCCATCATTGTCATCAGAGTCTAAAGAGAGTGATGGTGAAGATGGGGCTGTGTCCACATCAGAGGATGCGATTTATGGGGAGGAAGTGGAGCCATCTGTTGACTTGATGAAGACAATGCTGCGGACTTCATATTCAGAATCAAAGCAAGTAAAATCCAAGATGGAAGAGAAAAATGTAGAATTGGAGGTGGCCAATAATAGTAAGGCAACTAAAATTGATGTTATGAATGGGACTGGAGGTGGGATGGGATCAGATTTGGAATCCAAAAGGCAATCAAAGGGTTCAATTTCAAATGGCAATGGTGATTTTGAGGTTAAAGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAGGGTCCTGGAGGAATTGAAGATGGAAGTAATTGTGCCACTTTATCATCCGCAGTTACCAAGAAGGTTAGGTGTAAGGCCAATAGCTGGAATTTTGTTGCATGGACCACCTGGATGTGGTAAAACTACACTGGCTCATGCTATAGCTAATGAGACTGGTTTTCCATTCTATCAGATATCAGCCACAGAGGTAGTTTCTGGAGTTTCAGGAGCATCGGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCCTATAAGACTGCTCCATCAATTGTCTTTATTGACGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAGCGTGAGATGGAGAAACGTATTGTGACACAATTAATGACTTCGATGGATCAAACAAACAGGCTTCTTCAACCAGCTGATAGTTCAGAAAGTTCTGATGCTCATCCTGGCTATATTCTTGTTATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGGTTTGATCGTGAAATTGTCCTTGGTGTTCCCAATGAATGTGGGAGGGAGGAGATCTTGTCTGTGCTTACTCACAATCTAAAACTAGAGGGCTCCTTTGATCTTAGGAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTGGTTAACAAGGCAGGTAACCTTGCAATGAGAAGAATTATTGTTGAGAGGAAATGTGAGTTATCCCAAGATCTTTTAGATGAGCATTCTGAAGAATGGTGGAGGGAACCTTGGTTACCTGAAGAAATGGATAAGCTTGTCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAATTGGTACAACCTTCATCAAGAAGAGAAGGATTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGGGGGCTTGATCTTCTAAGACAAGAGTTTGAACGTTATATAGTTAGACGCGTAAAATATCCAGAGGATTATGAGGAATTTGGGGTGAATCTTGAGACAGGATTTTTGCTTTATGGACCACCAGGTTGTGGTAAAACACTGATAGCCAAAGCTGTTGCCAATGAAGCAGGAGCTAATTTTATTCATATTAAGGGCCCCGAACTTTTAAATAAATACGTTGGAGAAAGTGAACTAGCAGTACGGACATTGTTTAGTCGTGCAAGGACATGTTCACCGTGCATTCTTTTCTTTGATGAGGTGGATGCTTTGACAACCAATCGGGGTAAAGAAGGTGGATGGGTTGTTGAACGACTATTGAACCAGTTACTTATTGAATTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAACAGGCCTGAGGTGATGGACCGTGCTCTCCTTCGGCCTGGTCGGCTTGGCAAACTCCTCTACGTTCCTCTTCCAAGCGCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAGAAAGAAGCCAATTGATGACACTGTGGATTTGTGTGCCATTGGAAGAATGCAAGCTTGTGAAAGCCTCAGTGGCGCCGATCTCGCTGCATTGATGAATGAAGCAGCAGTGGCTGCTGCTGAAGAGAAATGGACATCAACAGAGAGCACTTCCAATGCGTCGACCATCAAGTTCAGCCATTTCGAGATGGCGCTGAGAAAAATCTCTCCATCAGTTTCAGAAATGCAAAAAAAGTACTATCAACGATTGTCAGAGACTTTCAAAGCTGCATGA 2454 0.4234 MKMGRNHIILRRRVESCKSRYSTIDEIVNHLRSNYPDYRRTRQQVLTRSVQEALESFKRGNKQSNKRPSTSIFKYDTSEDDNEEESRSASQKRRKKNNESEEKLQKMETLHLRKLRRDQGHASISSSSTSSPSLSSESKESDGEDGAVSTSEDAIYGEEVEPSVDLMKTMLRTSYSESKQVKSKMEEKNVELEVANNSKATKIDVMNGTGGGMGSDLESKRQSKGSISNGNGDFEVKGKGGPRFKDLGGMKRVLEELKMEVIVPLYHPQLPRRLGVRPIAGILLHGPPGCGKTTLAHAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQTNRLLQPADSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIVLGVPNECGREEILSVLTHNLKLEGSFDLRKIARSTPGFVGADLAALVNKAGNLAMRRIIVERKCELSQDLLDEHSEEWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDIGGLDLLRQEFERYIVRRVKYPEDYEEFGVNLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTNRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRALLRPGRLGKLLYVPLPSADERGLILKALARKKPIDDTVDLCAIGRMQACESLSGADLAALMNEAAVAAAEEKWTSTESTSNASTIKFSHFEMALRKISPSVSEMQKKYYQRLSETFKAA 817
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0587 817 MobiDBLite consensus disorder prediction 73 104 - -
Prci9g0587 817 Gene3D - 541 807 IPR027417 -
Prci9g0587 817 Pfam ATPase family associated with various cellular activities (AAA) 282 424 IPR003959 GO:0005524|GO:0016887
Prci9g0587 817 Pfam ATPase family associated with various cellular activities (AAA) 584 712 IPR003959 GO:0005524|GO:0016887
Prci9g0587 817 FunFam ATPase, AAA family protein 541 719 - -
Prci9g0587 817 ProSitePatterns AAA-protein family signature. 396 414 IPR003960 GO:0005524|GO:0016887
Prci9g0587 817 FunFam Cell division control protein 48 homolog C 427 535 - -
Prci9g0587 817 Gene3D - 236 425 IPR027417 -
Prci9g0587 817 MobiDBLite consensus disorder prediction 121 137 - -
Prci9g0587 817 Pfam AAA+ lid domain 449 482 IPR041569 -
Prci9g0587 817 MobiDBLite consensus disorder prediction 116 162 - -
Prci9g0587 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 534 IPR027417 -
Prci9g0587 817 PANTHER AAA-FAMILY ATPASE 68 815 - -
Prci9g0587 817 MobiDBLite consensus disorder prediction 203 241 - -
Prci9g0587 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 814 IPR027417 -
Prci9g0587 817 Gene3D - 714 793 - -
Prci9g0587 817 MobiDBLite consensus disorder prediction 56 72 - -
Prci9g0587 817 MobiDBLite consensus disorder prediction 56 104 - -
Prci9g0587 817 Gene3D - 427 535 - -
Prci9g0587 817 FunFam Ribosome biogenesis ATPase RIX7 233 425 - -
Prci9g0587 817 SMART AAA_5 579 715 IPR003593 GO:0016887
Prci9g0587 817 SMART AAA_5 278 428 IPR003593 GO:0016887
Prci9g0587 817 ProSitePatterns AAA-protein family signature. 683 701 IPR003960 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci9g0587 Prci-Chr9 20495663 20503660 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0587 514 815 Calmodulin-binding Proteins AT3G56690 42.763 1.07e-67 241
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0587 K14571 - tcc:18593187 1102.81