Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0586 ATGGAGACTTTACACCTTAGAAAGTTACGGAGGGATCAGGGTCATGCATCAATCTCTTCTTCTTCAACTTCTAGTCCATCATTGTCATCAGAGTCTAAAGAGAGTGATGGTGAAGATGGGGCTGTGTCCACATCAGAGGATGCGATTTATGGGGAGGAAGTGGAGCCATCTGTTGACTTGATGAAGACAATGCTGCGGACTTCATATTCAGAATCAAAGCAAGTAAAATCCAAGATGGAAGAGAAAAATGTAGAATTGGAGGTGGCCAATAATAGTAAGGCAACTAAAATTGATGTTATGAATGGGACTGGAGGTGGGATGGGATCAGATTTGGAATCCAAAAGGCAATCAAAGGGTTCAATTTCAAATGGCAATGGTGATTTTGAGGTTAAAGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAGGGTCCTGGAGGAATTGAAGATGGAAGTAATTGTGCCACTTTATCATCCGCAGTTACCAAGAAGGTTAGGTGTAAGGCCAATAGCTGGAATTTTGTTGCATGGACCACCTGGATGTGGTAAAACTACACTGGCTCATGCTATAGCTAATGAGACTGGTTTTCCATTCTATCAGATATCAGCCACAGAGGTAGTTTCTGGAGTTTCAGGAGCATCGGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCCTATAAGACTGCTCCATCAATTGTCTTTATTGACGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAGCGTGAGATGGAGAAACGTATTGTGACACAATTAATGACTTCGATGGATCAAACAAACAGGCTTCTTCAACCAGCTGATAGTTCAGAAAGTTCTGATGCTCATCCTGGCTATATTCTTGTTATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGGTTTGATCGTGAAATTGTCCTTGGTGTTCCCAATGAATGTGGGAGGGAGGAGATCTTGTCTGTGCTTACTCACAATCTAAAACTAGAGGGCTCCTTTGATCTTAGGAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTGGTTAACAAGGCAGGTAACCTTGCAATGAGAAGAATTATTGTTGAGAGGAAATGTGAGTTATCCCAAGATCTTTTAGATGAGCATTCTGAAGAATGGTGGAGGGAACCTTGGTTACCTGAAGAAATGGATAAGCTTGTCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAATTGGTACAACCTTCATCAAGAAGAGAAGGATTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGGGGGCTTGATCTTCTAAGACAAGAGTTTGAACGTTATATAGTTAGACGCGTAAAATATCCAGAGGATTATGAGGAATTTGGGGTGAATCTTGAGACAGGATTTTTGCTTTATGGACCACCAGGTTGTGGTAAAACACTGATAGCCAAAGCTGTTGCCAATGAAGCAGGAGCTAATTTTATTCATATTAAGGGCCCCGAACTTTTAAATAAATACGTTGGAGAAAGTGAACTAGCAGTACGGACATTGTTTAGTCGTGCAAGGACATGTTCACCGTGCATTCTTTTCTTTGATGAGGTGGATGCTTTGACAACCAATCGGGGTAAAGAAGGTGGATGGGTTGTTGAACGACTATTGAACCAGTTACTTATTGAATTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAACAGGCCTGAGGTGATGGACCGTGCTCTCCTTCGGCCTGGTCGGCTTGGCAAACTCCTCTACGTTCCTCTTCCAAGCGCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAGAAAGAAGCCAATTGATGACACTGTGGATTTGTGTGCCATTGGAAGAATGCAAGCTTGTGAAAGCCTCAGTGGCGCCGATCTCGCTGCATTGATGAATGAAGCAGCAGTGGCTGCTGCTGAAGAGAAATGGACATCAACAGAGAGCACTTCCAATGCGTCGACCATCAAGTTCAGCCATTTCGAGATGGCGCTGAGAAAAATCTCTCCATCAGTTTCAGAAATGCAAAAAAAGTACTATCAACGATTGTCAGAGACTTTCAAAGCTGCATGA 2136 0.427 METLHLRKLRRDQGHASISSSSTSSPSLSSESKESDGEDGAVSTSEDAIYGEEVEPSVDLMKTMLRTSYSESKQVKSKMEEKNVELEVANNSKATKIDVMNGTGGGMGSDLESKRQSKGSISNGNGDFEVKGKGGPRFKDLGGMKRVLEELKMEVIVPLYHPQLPRRLGVRPIAGILLHGPPGCGKTTLAHAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQTNRLLQPADSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIVLGVPNECGREEILSVLTHNLKLEGSFDLRKIARSTPGFVGADLAALVNKAGNLAMRRIIVERKCELSQDLLDEHSEEWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDIGGLDLLRQEFERYIVRRVKYPEDYEEFGVNLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTNRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRALLRPGRLGKLLYVPLPSADERGLILKALARKKPIDDTVDLCAIGRMQACESLSGADLAALMNEAAVAAAEEKWTSTESTSNASTIKFSHFEMALRKISPSVSEMQKKYYQRLSETFKAA 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0586 711 Gene3D - 608 687 - -
Prci9g0586 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 708 IPR027417 -
Prci9g0586 711 Pfam ATPase family associated with various cellular activities (AAA) 478 606 IPR003959 GO:0005524|GO:0016887
Prci9g0586 711 Pfam ATPase family associated with various cellular activities (AAA) 176 318 IPR003959 GO:0005524|GO:0016887
Prci9g0586 711 Gene3D - 321 429 - -
Prci9g0586 711 FunFam ATPase, AAA family protein 435 613 - -
Prci9g0586 711 ProSitePatterns AAA-protein family signature. 577 595 IPR003960 GO:0005524|GO:0016887
Prci9g0586 711 MobiDBLite consensus disorder prediction 97 135 - -
Prci9g0586 711 Gene3D - 435 701 IPR027417 -
Prci9g0586 711 PANTHER AAA-FAMILY ATPASE 46 709 - -
Prci9g0586 711 MobiDBLite consensus disorder prediction 15 31 - -
Prci9g0586 711 SMART AAA_5 172 322 IPR003593 GO:0016887
Prci9g0586 711 SMART AAA_5 473 609 IPR003593 GO:0016887
Prci9g0586 711 FunFam Cell division control protein 48 homolog C 321 429 - -
Prci9g0586 711 ProSitePatterns AAA-protein family signature. 290 308 IPR003960 GO:0005524|GO:0016887
Prci9g0586 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 428 IPR027417 -
Prci9g0586 711 Gene3D - 130 319 IPR027417 -
Prci9g0586 711 MobiDBLite consensus disorder prediction 1 57 - -
Prci9g0586 711 Pfam AAA+ lid domain 343 376 IPR041569 -
Prci9g0586 711 FunFam Ribosome biogenesis ATPase RIX7 127 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0586 Prci-Chr9 20495654 20503660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0586 135 709 Calmodulin-binding Proteins AT3G56690 35.714 4.36e-116 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0586 K14571 - tcc:18593187 1035.79