Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0582 ATGTCGGAGCACTTCGTCGGCGGCGAGGTGGAGCTACTAATGAAGCCTTTTCTGCAAAACGAAGACAATCGTCCCAAACCCTACAAAAGATGGCAATCTGCATATGTTAGTATCCGTTGCTCGAGAGTTTTCTTGTCGTTGCCATCATCTGGTACTGTTAGCCAAGCCACCCTCACCCATCTCATGAAGAAGAAGAACGTAGAAACCCTACAGAATCTTGGAGGCGTCCATGGTGTGGCTTCTGCTCTAAAAACCAGCGTTGACTATGGAGTCAGCGCCGTTGAGGATGATTCCAGCGACGTCGAGGGACGACAAAAAACTTTTGGTTCCAACACCTACCAAACACGACCTTCAAAAGGCTTCTTTCATTTTGTGGAAAGGGCTTTCTTGGACCCCATCATTCTTATTTTCTTGGCTTGTGCTGCTTTGTCTCTCGGCTTTGAAATCAAAAGGTACGGAGTCAAAAAAGGATTTTACGACGGTGGTACCATTTTCGTTGCTGTTTCGTTCATCATTGCCGCATGTTCCGTCAACAATTTCAGACAGAACAGGTTGTTAGACAAGCTGTCGCAAGATAGCAATAATATCGTCCAAGTCGAAGCCATACGCAGTGGTCGGCGACAACAAGTTTTGATATATGACATCGTTGTCGGCGACGTCGTGGTGTTGAAGATCGGAGACCAGGTTCCTGCTGATGGCTTATTCTTGGAAGGATATTCTCTGCTAGTTGATGAAAGCTTGACAAGTGGTGAGAGCCACCACGTTGAAATTAATGGCGACAAGAACCCATTCTTGTTCTCCGGGACCAAAGTGGCTAATGGATTTGCCAAAATGCTCGTTACTTCTGTTGGTATGAACACGACACGAGGTCAAATGATGAGTCCCATAAGCGGAGAAAACGATGAAGAAACCCCTCTACAATCACGCCTTAGAAAGCTTACTTCAACGATAGGCAAGGCTGGTTTGTTTGTGAATGTCCTACTAGTTCTCTACTTCACTGGCAACACAAAAGATGAAAATGGGAATAAAGAGTTCCATGGAATTGTGAATGGAGTTGTTGGAATTGTTGCAGCTTCTATTGCTATTGTTGCTGTTGCGATTCCAGAAGGGCTTCCTTTGGCTGTGACTTCAACTTTGGCTTACTCAATGAAAATGATGGCTGGCATGGCTATAGTGAGGAAGCTCTCTGCTTGTGAGACAATGGGGTCAGTTACAACCATTTGTATTGATAAGACCGGGACTCTTACACTTAATCAAATGAAGGTGACTAATTTCTGGCTTGGACAAGAACCTATCAAAGGGAAAGCTCATGAATCATTAATGCATTCAAAAGTTCTTCAACTAATCCAAGAAGGGGTTGCCCTTAACACAATAGGTAGTGTTTACAAGTTCAAATCAACAGATTCAGAATATGAGTTTACAAGTAATCCGATAGAAAAGGCCATTATTTCATGGGATGTTCTTGATTTGGCCATGAATATGGAGGAGTTGACACAAAATTGTACCATCCTTCATGCTAAAACCTTCAATTCAAAGAAGAAAAGAAGTCATGTTGTGATTAGAAGGAAAGCTGACAACAAAATTCATGCACATTGGAAAGGAGCAGCTGAGATAGTACTCAAATTTTGTTCGAAGTATTATGATGCTTCTGACAATATCAAAGATCTTGATAGTGACAAAAAGATGGAGTTTGAGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTCATATGTATTGCTTTTGCACATTTAGAAGTGACAAAAGAAGATGAACAAGGAAGCCAAAAGGTAAAAGAAGAAGGCCTCACCCTCTTAGGACTTGTTGGTATTAAGGATTCATGCCATCATGGTGTCTATAAAGATATACAAGATTGCCAACAAGCAGGTGTAAATGTAAAAATGATCACAGGAGACAATATTTTCACAGCTATAGCCATAGAGAGAGTGGATAAAATTTGCGTGATGGCACAATCCTCTCCCAAGGACAAGCTTCTTATGGTTCAATGCCTCAAACAAAAAGGTCATGTAGTTGCAATAATAGGAGATGATGCAAATGATGCAATGTCATTAAAGAAAGCTGATATAGGGCTTTGCAAGAAGATTCAAGGTAGTGAAGTTGCAAAAGAAAGCTCAGATATAATTATCTTGAATGATAGTTTTTCCTCAGTGGTCACAGTTCTAAAGTGGGGAAGATGTGTCTATCACAACATCCAAAAGTTCATTCAATTTCAACTGACAGTAAACATTGTTGCACTTACAATTAATTTTTTGGTTGCAGCATCAACAAATAAAGTGGCGTTAGCAACAGTTCAACTATTGTGGGTGAACTTCATAACAGACACTTTGGGCTCTCTAACTCTAGCAACAGAGAAGCCTACAATAGAGTTACTGAACAAACCCCCAAAGGGTAAAACTGAGCCTCTCATCGATATCATCATGTGGAGAAATCTCTTAGCTCAAGCTTTGTACCAGATCACAATTCTATTGACACTACAATTCATGGGTGAGGCTTTATTTGGGGTGAGCTCAAAGGTAAATGACACTTTGTTTTTCAACACATTTGTGCTATGCCAAGTGTTTAATGAGTTTAATGCAAGGAAGCTAGAGGAAAAGAATGTGTTCAAGGGGATTCATAGGAACAAGTTGTTTCTAGGGATGATAGGGATAACCATTGTGCTTCAGGTATTGATGGTGGAATTTTTGAAGAAATTTGCAAACACTGAAAGGTTGAATTGGGAGCAATGGGGTGCTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGCTGTGAAGTTCATTCATATCCCAGAGAGGCCATTGCTTAGTTTCTTGAACATGAAGAGGCAATAA 2856 0.41 MSEHFVGGEVELLMKPFLQNEDNRPKPYKRWQSAYVSIRCSRVFLSLPSSGTVSQATLTHLMKKKNVETLQNLGGVHGVASALKTSVDYGVSAVEDDSSDVEGRQKTFGSNTYQTRPSKGFFHFVERAFLDPIILIFLACAALSLGFEIKRYGVKKGFYDGGTIFVAVSFIIAACSVNNFRQNRLLDKLSQDSNNIVQVEAIRSGRRQQVLIYDIVVGDVVVLKIGDQVPADGLFLEGYSLLVDESLTSGESHHVEINGDKNPFLFSGTKVANGFAKMLVTSVGMNTTRGQMMSPISGENDEETPLQSRLRKLTSTIGKAGLFVNVLLVLYFTGNTKDENGNKEFHGIVNGVVGIVAASIAIVAVAIPEGLPLAVTSTLAYSMKMMAGMAIVRKLSACETMGSVTTICIDKTGTLTLNQMKVTNFWLGQEPIKGKAHESLMHSKVLQLIQEGVALNTIGSVYKFKSTDSEYEFTSNPIEKAIISWDVLDLAMNMEELTQNCTILHAKTFNSKKKRSHVVIRRKADNKIHAHWKGAAEIVLKFCSKYYDASDNIKDLDSDKKMEFEQIIQGMAASSLICIAFAHLEVTKEDEQGSQKVKEEGLTLLGLVGIKDSCHHGVYKDIQDCQQAGVNVKMITGDNIFTAIAIERVDKICVMAQSSPKDKLLMVQCLKQKGHVVAIIGDDANDAMSLKKADIGLCKKIQGSEVAKESSDIIILNDSFSSVVTVLKWGRCVYHNIQKFIQFQLTVNIVALTINFLVAASTNKVALATVQLLWVNFITDTLGSLTLATEKPTIELLNKPPKGKTEPLIDIIMWRNLLAQALYQITILLTLQFMGEALFGVSSKVNDTLFFNTFVLCQVFNEFNARKLEEKNVFKGIHRNKLFLGMIGITIVLQVLMVEFLKKFANTERLNWEQWGACILMAAISWPIGWAVKFIHIPERPLLSFLNMKRQ 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0582 951 PRINTS H+-transporting ATPase (proton pump) signature 712 737 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0582 951 PRINTS H+-transporting ATPase (proton pump) signature 680 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0582 951 SFLD Haloacid Dehalogenase 390 733 - -
Prci9g0582 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 410 416 IPR018303 -
Prci9g0582 951 Pfam Cation transporter/ATPase, N-terminus 74 144 IPR004014 -
Prci9g0582 951 SUPERFAMILY Calcium ATPase, transduction domain A 200 294 IPR008250 -
Prci9g0582 951 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Prci9g0582 951 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Prci9g0582 951 PRINTS P-type cation-transporting ATPase superfamily signature 680 699 - -
Prci9g0582 951 PRINTS P-type cation-transporting ATPase superfamily signature 704 716 - -
Prci9g0582 951 PRINTS P-type cation-transporting ATPase superfamily signature 408 422 - -
Prci9g0582 951 FunFam Calcium-transporting ATPase 697 939 - -
Prci9g0582 951 Pfam haloacid dehalogenase-like hydrolase 404 694 - -
Prci9g0582 951 PANTHER CATION TRANSPORTING ATPASE 52 646 - -
Prci9g0582 951 Gene3D - 127 404 - -
Prci9g0582 951 SFLD p-type atpase 390 733 IPR044492 -
Prci9g0582 951 Gene3D - 693 940 - -
Prci9g0582 951 Pfam E1-E2 ATPase 198 387 - -
Prci9g0582 951 Gene3D - 98 297 - -
Prci9g0582 951 SUPERFAMILY HAD-like 406 783 IPR036412 -
Prci9g0582 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 74 937 IPR023298 -
Prci9g0582 951 NCBIfam HAD-IC family P-type ATPase 603 760 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0582 951 NCBIfam HAD-IC family P-type ATPase 164 449 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0582 951 FunFam Calcium-transporting ATPase 418 613 - -
Prci9g0582 951 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 414 618 IPR023299 GO:0000166
Prci9g0582 951 Gene3D - 418 613 IPR023299 GO:0000166
Prci9g0582 951 Pfam Cation transporting ATPase, C-terminus 766 935 IPR006068 -
Prci9g0582 951 Gene3D - 405 646 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0582 Prci-Chr9 20363674 20366529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0582 26 951 Primary Pumps ATPases AT3G22910 56.344 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0582 K01537 - qsa:O6P43_021514 1200.65