Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0581 ATGTCTACGCCCTTCGTCACCAATATGGAGCGTATACAGACACTTTTGAATGTCCCTCACAACCTTAGAAAACCCAATAAAAAATGGCATTCGGCTTTTGTTAGCATCTATTGTTCTAGAGCTCTCTTCTCTCACTTCACATCCAATCTGCTCGCCACCACGAAGAACAAGAACGGGTCTAAGTTATCACCTTCTTCCTCCGACATTGTTATCAATGTAAACACAGATCGTTCGTTCAGTGTTAGCCAAACCACCCTCTCAAATCTCGTGAAGGGGAAAAATTCTGAGACACTTCAGAGTCTTGGTGGGGTCATTGGCGTGGTCTCTGCTCTAAAGACCAACATAGATTATGGAGTCAAAGGTGGTGGTGGTGATGATGAATCCAATGACGTCAATCGACGACGTGAAGCGTTTGGTTCCAACACTTACCCAAAACCACCTGCAAAAGGCTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGCTTGTGCTGCTCTGTCTCTTGGCTTCGGCATCAAAGAGAATGGAATCAACGAAGGATGGTACGACGGAGGAAGTATCTTCGTTGCTGTTTTTCTCGTCATTGCCGTGTCTTCCATTAGTAACTTCAGACAGAACAGACAGTTCGACAAGCTATCCCAGGTTAGCAATAACATCCAAGTCGATGTTCTACGAAGTGGTCGGCGGCAACAAGTTTCTATATATGACATTGTGGTCGGCGATGTTGTGTGGCTGAAAATTGGAGATCAAGTTCCTGCTGATGGCTTATTCTTGGAAGGCCATTCTTTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTTGAGATTAACGGTGACAAAAACCCATTTTTGTTCTCTGGCACGAAAGTGGCTGATGGGTTCGCCAAAATGCTCATTACTTCTGTTGGTACGAACACGACATGGGGTCAAATGATGTCTACAATTAGCAGAGACAACAACGAAGAAACCCCCTTGCAAGCTCGCCTCGATAAGCTTACTTCTGCTATAGGCAAGGTTGGTTTGGCTGTAGCTTTTCTTGTTCTTGTTGTGCTATTAGTCCGCTACTTCACAGGGAACACAACAGATGAGAATGGAAATAAAGAGTTCAATGGGAGCAGAACCAAGTTTGATGACATCATCAATGGAGTTGTGGGAATTATTGCTGCTGCAGTCACTATAGTTGTTGTTGCGATTCCAGAAGGGCTTCCTTTGGCCGTGACTTTGACATTGGCTTATTCCATGAAGAAAATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGCGAGACTATGGGATCTGCTACAACCATTTGCACTGATAAGACTGGGACTCTCACGCTCAATCAGATGAAGGTAACTAAGTTTTGGTTTGGGCAGCAACCAACGGAAGAGAAACCTCATAAATCATCAATCAATTCATATGTTCTACAGTTGATCCAAGAAGGAGTTGCCCTTAACACAACAGGTAGTGTTTACAAGTCTAAGTCATCAACCGATTTTGAATATGAGTTTTTAGGTAGTCCAACTGAGAAGGCTATTTTATCATGGGCTATTCATGATTTGGACATGCACATGGAGCAATTCATGCAAAATTGCACCATCCTTCATGTGGAAGCTTTCAATTCAAAGAAGAAAAGAAGTGGGGTTTTGATTCAAAGGAAAGCAAATAATAAAATTCATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAATTGTGTTCGAAGTACTATGATGCTTCTGGCAATATCAAAGATCTTGACAATGACAAAAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGTAGCCTCAGGTGTATTGCTTTCGCACATTCAGAAGTAATAAAAGAAGATGAACAAGGAAGCCAAAAGGTAATAGAAGAAGGCCTCACCCTCTTAGGATTTGTTGGTATTAAGGATCCATGTCGTCTAGGTGTCAAGAAAGCTGTGCAAGATTGCCAACAAGCAGGAGTAAATGTGAAGATGATAACTGGAGACAATGTTTTCACAGCTAAGGCCATAGCCACAGAATGTGACATCCTCAAGCCTAATCATGACACAGAAAAAGCAGTAATTGAAGGTGAGGTATTCCGAAACTTATCTCCTAAAGAAAGACTAGAGAGAGTGGAAAAAATTTGTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACTAATGATGCTCCAGCATTGAAAGAAGCTAATATAGGACTTTCTATGGGGATACAAGGTACTGAAGTTGCAAAAGAGAGCTCAGATATAGTTATACTGGATGATAATTTCGCCTCAATTGCTACAGTTCTAAAGTGGGGAAGGTGCGTCTATAACAACATTCAAAAGTTCATCCAGTTTCAACTAACAGTAAATGTTGCAGCACTTACAATTAACTGTGTGGCTGCAATATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTCTTGTGGGTGAACTTGATAATGGACACTTTGGGTGCTCTAGCTCTGGCAACAGAGAAGCCTACAATGGATTTATTGGACAAACCTCCAGTAGGTAAAATTGAGCCTCTCATCACCAACATAATGTGGAGAAATCTCTTAACCCAAGCTTTATACCAAATCACAATTCTACTAACACTACAATTCAAGGGTGAGGCTTTATTTGGGGTGAGTTCAGAGGTAAATGACACATTGATTTTCAACACATTTGTGCTATGCCAAGTGTTTAATGAGTTTAATGCAAGGAAGCTAGAGCAAAAGAATGTTTTCAAGGGGATTCACAGGAATAAGTTGTTTATAGGGATTATAGGGATGACCATTGTGCTTCAAGTATTGATGGTGGAATTTTTGAAGAAATTTGCAAACACTGAAAGGTTGAATTGGGGTCAATGGGGTGCTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCTGTCCTTGAGAGACCACTACTTAGTTTTCTTAACATGAAGAGGCAATGA 3081 0.42 MSTPFVTNMERIQTLLNVPHNLRKPNKKWHSAFVSIYCSRALFSHFTSNLLATTKNKNGSKLSPSSSDIVINVNTDRSFSVSQTTLSNLVKGKNSETLQSLGGVIGVVSALKTNIDYGVKGGGGDDESNDVNRRREAFGSNTYPKPPAKGFFHFVIEGFKDPTILILLACAALSLGFGIKENGINEGWYDGGSIFVAVFLVIAVSSISNFRQNRQFDKLSQVSNNIQVDVLRSGRRQQVSIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFAKMLITSVGTNTTWGQMMSTISRDNNEETPLQARLDKLTSAIGKVGLAVAFLVLVVLLVRYFTGNTTDENGNKEFNGSRTKFDDIINGVVGIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWFGQQPTEEKPHKSSINSYVLQLIQEGVALNTTGSVYKSKSSTDFEYEFLGSPTEKAILSWAIHDLDMHMEQFMQNCTILHVEAFNSKKKRSGVLIQRKANNKIHAHWKGAAEMVLKLCSKYYDASGNIKDLDNDKKLVFEQIIQGMAASSLRCIAFAHSEVIKEDEQGSQKVIEEGLTLLGFVGIKDPCRLGVKKAVQDCQQAGVNVKMITGDNVFTAKAIATECDILKPNHDTEKAVIEGEVFRNLSPKERLERVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEANIGLSMGIQGTEVAKESSDIVILDDNFASIATVLKWGRCVYNNIQKFIQFQLTVNVAALTINCVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMDLLDKPPVGKIEPLITNIMWRNLLTQALYQITILLTLQFKGEALFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEQKNVFKGIHRNKLFIGIIGMTIVLQVLMVEFLKKFANTERLNWGQWGACILMAAISWPIGWVVKFIPVLERPLLSFLNMKRQ 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0581 1026 Gene3D - 157 1010 - -
Prci9g0581 1026 SUPERFAMILY Calcium ATPase, transduction domain A 225 324 IPR008250 -
Prci9g0581 1026 Gene3D - 460 656 IPR023299 GO:0000166
Prci9g0581 1026 SUPERFAMILY Calcium ATPase, transmembrane domain M 106 1012 IPR023298 -
Prci9g0581 1026 Gene3D - 447 800 IPR023214 -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Prci9g0581 1026 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Prci9g0581 1026 SMART Cation_ATPase_N_a_2 100 179 IPR004014 -
Prci9g0581 1026 SFLD p-type atpase 432 808 IPR044492 -
Prci9g0581 1026 FunFam Calcium-transporting ATPase 460 656 - -
Prci9g0581 1026 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 661 IPR023299 GO:0000166
Prci9g0581 1026 FunFam Calcium-transporting ATPase 199 326 - -
Prci9g0581 1026 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Prci9g0581 1026 SFLD Haloacid Dehalogenase 432 808 - -
Prci9g0581 1026 Pfam E1-E2 ATPase 227 428 - -
Prci9g0581 1026 NCBIfam HAD-IC family P-type ATPase 194 366 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 NCBIfam HAD-IC family P-type ATPase 392 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 NCBIfam HAD-IC family P-type ATPase 728 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 Gene3D - 128 326 - -
Prci9g0581 1026 Pfam Cation transporter/ATPase, N-terminus 128 174 IPR004014 -
Prci9g0581 1026 NCBIfam calcium-translocating P-type ATPase, PMCA-type 74 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci9g0581 1026 FunFam Calcium-transporting ATPase 772 1014 - -
Prci9g0581 1026 PANTHER CATION TRANSPORTING ATPASE 72 1012 - -
Prci9g0581 1026 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0581 1026 FunFam Calcium-transporting ATPase 651 800 - -
Prci9g0581 1026 SUPERFAMILY HAD-like 448 860 IPR036412 -
Prci9g0581 1026 Pfam haloacid dehalogenase-like hydrolase 447 769 - -
Prci9g0581 1026 Pfam Cation transporting ATPase, C-terminus 840 1010 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0581 Prci-Chr9 20290720 20294450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0581 12 1026 Primary Pumps ATPases AT3G22910 67.808 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0581 K01537 - qsa:O6P43_021514 1516.9