Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0580 ATGGCATTTGTGACCAATTTGGAGACAATACAAACACTTCTGGCTGCCCCAAAGAATCTCAGCAAACCAAACAAAAAATGGCATTTTGCGTTTGTTAGCATATATTGTTCCAGAGCTCTCTTGTCTCACTTCAAATCCAATTTGCTTCTCCCCATCACCACCGACACCAAAAAGAAGAACAAGCCTGAGTTGTCACCTTCTTCCTCCTACACCGTCATTGATTTAAACCCAAATCATTCCTTTAGCGTTACTCAAACCACCCTCAGTCATCTCGTGAAGGAGAAGAATATAGAAACTCTGCAAAATCTTGGTGGGGTCCATGGTGTCGTCTCTGCTCTAAAAACCGACGTAAATTATGGAGTCAAAGGCGGTGATGATGATGACGATTCCAATGACGTCATTCAGCGGCGTGACGCGTTTGGTTCTAACAACTACGCAAAACCACCTACGAGAGGTTTCCTTCACTTTGTGATTGAAGGCTTCAAGGATCCAACCATTCTGATTCTCTTGGTTTGTGCTGCTCTGTCTCTTGGCTTTGGCATCAAAGAGAAAGGAATCAAGGAAGGCTGGTATGAAGGTGGAAGCATCTTTGTTGCCGTTTTTCTTGTCATTGTTGTGTCTTCCATCAGTAACTATAAACAGAACAGACAATTTGACAAGTTGTCCCAAGTTAGCAATAATATCCAAGTTGATGTTCTACGCAGTGGTCGCCGGCAACAAATTTCTATATACGACATCGTGGTCGGTGATGTTGTGTGGTTGAAGATTGGAGACCAAGTTCCCGCTGATGGCTTATTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGGGAGAGCGACCATGTAGAAATTAACGGAGATAAAATCCCGTTTTTGTTCTCTGGCACAAAAGTGGCTGATGGGTTCGCCAAAATGCTCGTTACTGCTGTTGGGATGAACACGACATGGGGTCAAATGATGTCTACGATAAGCAGAGACAACAATGAAGAAACCCCTTTGCAAGAACGCCTTAATAAGCTTACTACAGCAATAGGCAAGATTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTGTGTTAGTTCGATACTTCACAGGGAACACAACAGATGAGAATGGGAATAAAGAGTTCAATGGGAGCAACACCAAGTTTAATGACATCATGAATGGAGTTGTCAGAATTGTTGCTGCTGCAGTCACTATTGTTGTTGTTGCAATTCCAGAAGGGCTCCCTTTGGCTGTGACTTTGACACTAGCTTATTCCATGAAGAAGATGATGGTTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGATCTGCTACAACCATATGCACCGATAAGACTGGGACTCTCACACTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGAAAAGAACTCATCGAAGGGAAGGCTCATACATCATCATTAGTAAATTCAAATGTTCTTCAGTTGATCCAAGAAGGGGTTGCCCTTAACACAACAGGTAGTGTTTATAAGTCTAAATCAATAGATCCTGAATATGAATTTACAGGTAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGAATTGAACATGAACATGAAGGAGTTGACACAAAACTGCACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAACCAAGTCCATGCACATTGGAAAGGAGCAGCTGAAATGGTACTAAGATTATGCTCAAAGTACTACGATGCTTCCGGCAATATAAAAGAACTTGACAACAGCAGTCGGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCTAGTAGCCTCAGATGTATTGCTTTTGCACACACAAAAGTAGCTGAAGAAAATGATGGAGGAGTCCAAAAGGTAAAAGAAGATGGCCTCACCCTCTTAGGAGTTGTTGGTATTAAGGATCCATGTCGTCCAGGTGTCAAGAAAGCTGTAAATGATTGCCAACAAGCAGGAGTAAATGTGAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGTGGTATTCTCCATCCAAATCAAGACACATTAAAAGCTATAATTGAAGGTGAGGTATTTCGAAACTTATCTCCCGAAGAGAGACTAGATAGGGTGGAGAAAATTTGTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAGAGGCCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCCGCATTAAAGGAAGCTGATATAGGACTTTCGATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGATATAGTTATCTTGGATGATAATTTTGCCTCAGTTGTGACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAATATCCAAAAGTTCATTCAGTTTCAACTGACGGTAAATGTTGCGGCACTTGCAATCAACTTTGTCGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTCTTGTGGGTGAACTTGATAATGGACACCTTGGGTGCTCTAGCTCTGGCAACGGAGAAGCCTACAACGGAGTTACTTAACAAACCCCCAGTGGGTAGAACTGAGCCTCTTATCACCAACATCATGTGGAGAAATCTATTAGCCCAAGCTTTATACCAGATCACAATTCTCTTGACATTACAATTCAAAGGTGAGGCTATATTTAGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTTAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGGATTCACAAGAACAAGTTGTTTCTAGGAATCATAGGGATAACCATCGTGCTTCAAGTATTGATGGTTGAGTTTCTAAAGAAATTTGCAGATACTGAGAGGTTAAACTGGGGACAATGGGGTGCTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCTGTGCCAAGAAAACCACTGTTCACCTTCTTGAACATGAAGAAGAAGCAATGA 3090 0.4223 MAFVTNLETIQTLLAAPKNLSKPNKKWHFAFVSIYCSRALLSHFKSNLLLPITTDTKKKNKPELSPSSSYTVIDLNPNHSFSVTQTTLSHLVKEKNIETLQNLGGVHGVVSALKTDVNYGVKGGDDDDDSNDVIQRRDAFGSNNYAKPPTRGFLHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGWYEGGSIFVAVFLVIVVSSISNYKQNRQFDKLSQVSNNIQVDVLRSGRRQQISIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKIPFLFSGTKVADGFAKMLVTAVGMNTTWGQMMSTISRDNNEETPLQERLNKLTTAIGKIGLAVAFLVLVVVLVRYFTGNTTDENGNKEFNGSNTKFNDIMNGVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMVDMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGKELIEGKAHTSSLVNSNVLQLIQEGVALNTTGSVYKSKSIDPEYEFTGSPTEKAILSWAVLELNMNMKELTQNCTILHVEAFNSKKKRSGVLIRRKADNQVHAHWKGAAEMVLRLCSKYYDASGNIKELDNSSRLVFEQIIQGMAASSLRCIAFAHTKVAEENDGGVQKVKEDGLTLLGVVGIKDPCRPGVKKAVNDCQQAGVNVKMITGDNVFTAKAIATECGILHPNQDTLKAIIEGEVFRNLSPEERLDRVEKICVMARSSPFDKLLMVQCLKQRGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTTELLNKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFRVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKLFLGIIGITIVLQVLMVEFLKKFADTERLNWGQWGACILMAAISWPIGWVVKFIPVPRKPLFTFLNMKKKQ 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0580 1029 SMART Cation_ATPase_N_a_2 102 181 IPR004014 -
Prci9g0580 1029 FunFam Calcium-transporting ATPase 774 1016 - -
Prci9g0580 1029 Gene3D - 131 328 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Prci9g0580 1029 PRINTS P-type cation-transporting ATPase superfamily signature 275 289 - -
Prci9g0580 1029 Gene3D - 462 658 IPR023299 GO:0000166
Prci9g0580 1029 FunFam Calcium-transporting ATPase 203 328 - -
Prci9g0580 1029 Pfam Cation transporter/ATPase, N-terminus 123 176 IPR004014 -
Prci9g0580 1029 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 1015 IPR023298 -
Prci9g0580 1029 Pfam haloacid dehalogenase-like hydrolase 449 771 - -
Prci9g0580 1029 Pfam E1-E2 ATPase 229 430 - -
Prci9g0580 1029 SUPERFAMILY Calcium ATPase, transduction domain A 227 326 IPR008250 -
Prci9g0580 1029 Pfam Cation transporting ATPase, C-terminus 842 1012 IPR006068 -
Prci9g0580 1029 NCBIfam calcium-translocating P-type ATPase, PMCA-type 79 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci9g0580 1029 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Prci9g0580 1029 PANTHER CATION TRANSPORTING ATPASE 69 1014 - -
Prci9g0580 1029 FunFam Calcium-transporting ATPase 652 802 - -
Prci9g0580 1029 CDD P-type_ATPase_Ca_PMCA-like 135 890 - -
Prci9g0580 1029 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 PRINTS H+-transporting ATPase (proton pump) signature 789 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 PRINTS H+-transporting ATPase (proton pump) signature 757 773 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 NCBIfam HAD-IC family P-type ATPase 196 369 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 NCBIfam HAD-IC family P-type ATPase 393 488 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 NCBIfam HAD-IC family P-type ATPase 730 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0580 1029 Gene3D - 159 1012 - -
Prci9g0580 1029 Gene3D - 449 802 IPR023214 -
Prci9g0580 1029 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 663 IPR023299 GO:0000166
Prci9g0580 1029 FunFam Calcium-transporting ATPase 462 658 - -
Prci9g0580 1029 SUPERFAMILY HAD-like 450 862 IPR036412 -
Prci9g0580 1029 SFLD p-type atpase 434 810 IPR044492 -
Prci9g0580 1029 SFLD Haloacid Dehalogenase 434 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0580 Prci-Chr9 20261189 20264831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0580 10 1028 Primary Pumps ATPases AT3G22910 67.934 0.0 1333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0580 K01537 - gmx:100793918 1542.32