Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0579 ATGGCATTTGTGACCAATTTGGAGACAATACAAACACTTCTGGCTGCCCCAAAGAATCTCAGCAAACCAAACAAAAAATGGCATTTTGCGTTTGTTAGCATATATTGTTCCAGAGCTCTCTTGTCTCACTTCAAATCCAATTTGCTTCTCCCCATCACCACCGACACCAAAAAGAAGAACAAGCCTGAGTTGTCACCTTCTTCCTCCTACACCGTCATTGATTTAAACCCAAATCATTCCTTTAGCGTTACTCAAACCACCCTCAGTCATCTCGTGAAGGAGAAGAATATAGAAACTCTGCAAAATCTTGGTGGGGTCCATGGTGTCGTCTCTGCTCTAAAAACCGACGTAAATTATGGAGTCAAAGGCGGTGATGATGATGACGATTCCAATGACGTCATTCAGCGGCGTGACGCGTTTGGTTCTAACAACTACGCAAAACCACCTACGAGAGGTTTCCTTCACTTTGTGATTGAAGGCTTCAAGGATCCAACCATTCTGATTCTCTTGGTTTGTGCTGCTCTGTCTCTTGGCTTTGGCATCAAAGAGAAAGGAATCAAGGAAGGCTGTGGTCGCCGGCAACAAATTTCTATATACGACATCGTGGTCGGTGATGTTGTGTGGTTGAAGATTGGAGACCAAGTTCCCGCTGATGGCTTATTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGGGAGAGCGACCATGTAGAAATTAACGGAGATAAAATCCCGTTTTTGTTCTCTGGCACAAAAGTGGCTGATGGGTTCGCCAAAATGCTCGTTACTGCTGTTGGGATGAACACGACATGGGGTCAAATGATGTCTACGATAAGCAGAGACAACAATGAAGAAACCCCTTTGCAAGAACGCCTTAATAAGCTTACTACAGCAATAGGCAAGATTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTGTGTTAGTTCGATACTTCACAGGGAACACAACAGATGAGAATGGGAATAAAGAGTTCAATGGGAGCAACACCAAGTTTAATGACATCATGAATGGAGTTGTCAGAATTGTTGCTGCTGCAGTCACTATTGTTGTTGTTGCAATTCCAGAAGGGCTCCCTTTGGCTGTGACTTTGACACTAGCTTATTCCATGAAGAAGATGATGGTTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGATCTGCTACAACCATATGCACCGATAAGACTGGGACTCTCACACTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGAAAAGAACTCATCGAAGGGAAGGCTCATACATCATCATTAGTAAATTCAAATGTTCTTCAGTTGATCCAAGAAGGGGTTGCCCTTAACACAACAGGTAGTGTTTATAAGTCTAAATCAATAGATCCTGAATATGAATTTACAGGTAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGAATTGAACATGAACATGAAGGAGTTGACACAAAACTGCACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAACCAAGTCCATGCACATTGGAAAGGAGCAGCTGAAATGGTACTAAGATTATGCTCAAAGTACTACGATGCTTCCGGCAATATAAAAGAACTTGACAACAGCAGTCGGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCTAGTAGCCTCAGATGTATTGCTTTTGCACACACAAAAGTAGCTGAAGAAAATGATGGAGGAGTCCAAAAGGTAAAAGAAGATGGCCTCACCCTCTTAGGAGTTGTTGGTATTAAGGATCCATGTCGTCCAGGTGTCAAGAAAGCTGTAAATGATTGCCAACAAGCAGGAGTAAATGTGAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGTGGTATTCTCCATCCAAATCAAGACACATTAAAAGCTATAATTGAAGGTGAGGTATTTCGAAACTTATCTCCCGAAGAGAGACTAGATAGGGTGGAGAAAATTTGTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAGAGGCCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCCGCATTAAAGGAAGCTGATATAGGACTTTCGATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGATATAGTTATCTTGGATGATAATTTTGCCTCAGTTGTGACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAATATCCAAAAGTTCATTCAGTTTCAACTGACGGTAAATGTTGCGGCACTTGCAATCAACTTTGTCGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTCTTGTGGGTGAACTTGATAATGGACACCTTGGGTGCTCTAGCTCTGGCAACGGAGAAGCCTACAACGGAGTTACTTAACAAACCCCCAGTGGGTAGAACTGAGCCTCTTATCACCAACATCATGTGGAGAAATCTATTAGCCCAAGCTTTATACCAGATCACAATTCTCTTGACATTACAATTCAAAGGTGAGGCTATATTTAGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTTAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGGATTCACAAGAACAAGTTGTTTCTAGGAATCATAGGGATAACCATCGTGCTTCAAGTATTGATGGTTGAGTTTCTAAAGAAATTTGCAGATACTGAGAGGTTAAACTGGGGACAATGGGGTGCTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCTGTGCCAAGAAAACCACTGTTCACCTTCTTGAACATGAAGAAGAAGCAATGA 2955 0.4244 MAFVTNLETIQTLLAAPKNLSKPNKKWHFAFVSIYCSRALLSHFKSNLLLPITTDTKKKNKPELSPSSSYTVIDLNPNHSFSVTQTTLSHLVKEKNIETLQNLGGVHGVVSALKTDVNYGVKGGDDDDDSNDVIQRRDAFGSNNYAKPPTRGFLHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGCGRRQQISIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKIPFLFSGTKVADGFAKMLVTAVGMNTTWGQMMSTISRDNNEETPLQERLNKLTTAIGKIGLAVAFLVLVVVLVRYFTGNTTDENGNKEFNGSNTKFNDIMNGVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMVDMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGKELIEGKAHTSSLVNSNVLQLIQEGVALNTTGSVYKSKSIDPEYEFTGSPTEKAILSWAVLELNMNMKELTQNCTILHVEAFNSKKKRSGVLIRRKADNQVHAHWKGAAEMVLRLCSKYYDASGNIKELDNSSRLVFEQIIQGMAASSLRCIAFAHTKVAEENDGGVQKVKEDGLTLLGVVGIKDPCRPGVKKAVNDCQQAGVNVKMITGDNVFTAKAIATECGILHPNQDTLKAIIEGEVFRNLSPEERLDRVEKICVMARSSPFDKLLMVQCLKQRGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTTELLNKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFRVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKLFLGIIGITIVLQVLMVEFLKKFADTERLNWGQWGACILMAAISWPIGWVVKFIPVPRKPLFTFLNMKKKQ 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0579 984 PANTHER CATION TRANSPORTING ATPASE 71 189 - -
Prci9g0579 984 Pfam E1-E2 ATPase 191 385 - -
Prci9g0579 984 Gene3D - 417 613 IPR023299 GO:0000166
Prci9g0579 984 FunFam Calcium-transporting ATPase 417 613 - -
Prci9g0579 984 Pfam Cation transporter/ATPase, N-terminus 123 176 IPR004014 -
Prci9g0579 984 SMART Cation_ATPase_N_a_2 102 181 IPR004014 -
Prci9g0579 984 NCBIfam HAD-IC family P-type ATPase 348 443 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0579 984 NCBIfam HAD-IC family P-type ATPase 685 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0579 984 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 970 IPR023298 -
Prci9g0579 984 SUPERFAMILY Calcium ATPase, transduction domain A 191 281 IPR008250 -
Prci9g0579 984 FunFam Calcium-transporting ATPase 607 757 - -
Prci9g0579 984 SFLD C1.7: P-type atpase like 389 765 - -
Prci9g0579 984 Gene3D - 404 757 IPR023214 -
Prci9g0579 984 SUPERFAMILY HAD-like 405 817 IPR036412 -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 606 617 - -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 712 731 - -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 736 748 - -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 407 421 - -
Prci9g0579 984 PRINTS P-type cation-transporting ATPase superfamily signature 230 244 - -
Prci9g0579 984 FunFam Calcium-transporting ATPase 729 971 - -
Prci9g0579 984 NCBIfam calcium-translocating P-type ATPase, PMCA-type 191 969 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci9g0579 984 SFLD p-type atpase 389 765 IPR044492 -
Prci9g0579 984 Pfam Cation transporting ATPase, C-terminus 797 967 IPR006068 -
Prci9g0579 984 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 413 618 IPR023299 GO:0000166
Prci9g0579 984 ProSitePatterns E1-E2 ATPases phosphorylation site. 409 415 IPR018303 -
Prci9g0579 984 Gene3D - 284 967 - -
Prci9g0579 984 Pfam haloacid dehalogenase-like hydrolase 404 726 - -
Prci9g0579 984 Gene3D - 192 283 - -
Prci9g0579 984 PRINTS H+-transporting ATPase (proton pump) signature 564 582 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0579 984 PRINTS H+-transporting ATPase (proton pump) signature 744 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0579 984 PRINTS H+-transporting ATPase (proton pump) signature 712 728 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0579 Prci-Chr9 20261137 20264831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0579 10 983 Primary Pumps ATPases AT3G22910 64.717 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0579 K01537 - gmx:100793918 1445.64