Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0578 ATGTCTATGGCACTTGTGACAAATTTGGAGACAATGCATACACTTTTGACTGCTCGAAAGAATCTTAGCAAACCAAACAAAAAATGGCATTTTGCATTTGTTAGCATATATTGTTCCAGAGCTCTCTTGTCTCACTTCAAATCCAATTTGCTTCTTCCCATCACCACCGACACCAAAAAGAAGAACAAGCCCGAGTTGTCACCTTCTTCCTCCGACACCGTCATTGATTTAGACACCGACCATTCCTTTAGTGTTAATAAAACCACCCTTAGTCATCTTGTGAAGGAGAAAAATATCGAAACTCTGCAAAATCTTGGTGGGGTCCATGGATTGGTCTCTGCTCTAAAAACCGACGTAAATTATGGAGTCAAAGGGGCCGATGATAATGATGATAATGATGATCTCAATGACGTCATTCAGAGGCGTGTCGCATTTGGTTCTAACACTTACCCAAAACCACCTACGAGAGGTTTCTTTCACTTTGCTATTGAAGGCTTCAAGGATCCAACCATTCTGATTCTCTTGGTTTGTGCTGCTCTGTCTCTTGTCTTTGGCATCAAAGAGGAAGGAATCAAGGAAGGCTGGTATGAAGGTGGAAGCATCTTCGTTGCTGTTTTTCTTGTCATTGCTGTGTCGTCTATCAGTAACTATAGACAGAACAGACAATTCGACAAGCTGTCCCAAGTTAGCAATAACATCCAAGTTGATGTTCTACGCAGTGGTCGCCGGCAACAAGTTTCTATATATGACATTGTGGTCGGCGATGTCGTGATGTTGAAGATTGGAGACCAAGTTCCCGCTGATGGCTTATTCTTGGAAGGCCATTCTTTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGTGACCACGTAGAAATTAACGGAGACAAAAACCCATTTTTGTTCTCTGGGACCAAAGTGGCTGATGGGTTTGCCAAAATGGTCGTTACTTCCGTTGGGATGAACACGACATGGGGTCAAATGATGTCTACGATAAGCAGAGATAACAATGAAGAAACCCCTTTGCAAGAACGCCTTAATAAGCTTACTACAGCGATAGGTAAGGTTGGTTTAGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTAGTTCGATACTTCACAGGGAACACAACAGATGAGAAGGGGAATAAGGAGTTTAATGGGAGTAACACCAAGTTTAATGATATAATGAACGGAGTTGTGAAAATTGTTGCTGCTGCAGTCACTATTGTAGTTGTTGCAATTCCAGAAGGGCTTCCTTTGGCTGTGACTTTGACGCTGGCCTATTCTATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAATCTCTCTGCTTGCGAGACTATGGGGTCTGCTAACACAATATGCACTGATAAGACTGGGACTCTCACACTTAATCAGATGAAGGTGACTAAGTTTTGGCTTGGAAAAGAACCTATCGAAGGGAAGGCACATACATCATCATCAATCAATTCAAATGTTCTTCAATTGATCCAAGAAGGGGTTGCCCTTAACACAACAGGTAGTGTTTACAAGTCTAAATTAACAGATCCTGAATATGAGTTTACAGGCAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGAATTGAACATGAACATGGAGGATTTGGCACAAAACTGCACCACCCTTCATGTGGAAGCCTTTAATTCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAACAAAGTCCATGCGCATTGGAAAGGAGCAGCTGAGATGGTACTAAGATTGTGCTCAAAGTACTATGATGCTTTTGGAAATATAAAAGAACTTGACGACAGCAGCCGGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCTAGTAGCCTCAGATGTATTGCTTTCGCACACACAAATGTAGTTGAAGAAAATGATAGAGGAGTCCAAAAGGTAAAAGAAGATGGCCTTACCCTCTTAGGAGTTGTTGGTATTAAGGATCCATGTCGTCCAGGTGTCAAGAAAGCTGTAGATGATTGCCAACAAGCAGGAGTAAATGTGAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCTATAGCCACAGAATGTGGTATTCTCCATCCAAATCAAGACACATCAAAAGCTATAATCGAAGGTGAGGTATTTCGAAACTTGTCTCCCGAAGAGAGACTAGAGAGGGTGGAGAAAATTTGTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAAAGAGGCCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCAGCATTAAAGGAAGCTGATATAGGACTTTCGATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGATATAGTTATCTTGGATGATAATTTTGCCTCAGTTGTGACAGTTTTAAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAATTTCAACTGACAGTAAATGTTGCGGCACTTGCAATCAACTTTGTCGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTCTTGTGGGTGAACTTGATAATGGACACCTTGGGTGCTCTAGCTCTGGCAACAGAGAAGCCTACAACGGAGTTACTTAACAAACCCCCAGTGGGTAGAACTGAGCCTCTCATCACTAACATCATGTGGAGAAATCTCTTATCCCAAGCTTTATACCAAATCACAATTCTCCTGACATTACAATTTAAAGGTGAGGATATATTTGGTGTGAGTTCAGAGGTAAATGACACATTGATTTTCAATACCTTTGTGTTATGTCAAATGTTTAATGAGTTTAATGCGAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGAATTCACAAGAACAAGTTGTTTGTAGGAATCATAGGGATAACCATCATGCTTCAGGTATTGATGGTGGAGTTTCTAAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAATGGGGTGTTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCTGTCCCAAGAAAACCATTGTTCAGTTTCTTGAACATGAAGAAGAAGCAATGA 3105 0.4171 MSMALVTNLETMHTLLTARKNLSKPNKKWHFAFVSIYCSRALLSHFKSNLLLPITTDTKKKNKPELSPSSSDTVIDLDTDHSFSVNKTTLSHLVKEKNIETLQNLGGVHGLVSALKTDVNYGVKGADDNDDNDDLNDVIQRRVAFGSNTYPKPPTRGFFHFAIEGFKDPTILILLVCAALSLVFGIKEEGIKEGWYEGGSIFVAVFLVIAVSSISNYRQNRQFDKLSQVSNNIQVDVLRSGRRQQVSIYDIVVGDVVMLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFAKMVVTSVGMNTTWGQMMSTISRDNNEETPLQERLNKLTTAIGKVGLAVAFLVLVVMLVRYFTGNTTDEKGNKEFNGSNTKFNDIMNGVVKIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRNLSACETMGSANTICTDKTGTLTLNQMKVTKFWLGKEPIEGKAHTSSSINSNVLQLIQEGVALNTTGSVYKSKLTDPEYEFTGSPTEKAILSWAVLELNMNMEDLAQNCTTLHVEAFNSKKKRSGVLIRRKADNKVHAHWKGAAEMVLRLCSKYYDAFGNIKELDDSSRLVFEQIIQGMAASSLRCIAFAHTNVVEENDRGVQKVKEDGLTLLGVVGIKDPCRPGVKKAVDDCQQAGVNVKMITGDNVFTAKAIATECGILHPNQDTSKAIIEGEVFRNLSPEERLERVEKICVMARSSPFDKLLMVQCLKQRGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTTELLNKPPVGRTEPLITNIMWRNLLSQALYQITILLTLQFKGEDIFGVSSEVNDTLIFNTFVLCQMFNEFNARKLEKKNVFKGIHKNKLFVGIIGITIMLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWVVKFIPVPRKPLFSFLNMKKKQ 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0578 1034 Gene3D - 137 333 - -
Prci9g0578 1034 NCBIfam HAD-IC family P-type ATPase 201 374 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 NCBIfam HAD-IC family P-type ATPase 735 843 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 NCBIfam HAD-IC family P-type ATPase 398 486 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 SFLD C1.7: P-type atpase like 439 815 - -
Prci9g0578 1034 ProSitePatterns E1-E2 ATPases phosphorylation site. 459 465 IPR018303 -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 678 688 - -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 656 667 - -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 786 798 - -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Prci9g0578 1034 PRINTS P-type cation-transporting ATPase superfamily signature 457 471 - -
Prci9g0578 1034 Gene3D - 467 663 IPR023299 GO:0000166
Prci9g0578 1034 PANTHER CATION TRANSPORTING ATPASE 71 1019 - -
Prci9g0578 1034 SMART Cation_ATPase_N_a_2 107 186 IPR004014 -
Prci9g0578 1034 SFLD p-type atpase 439 815 IPR044492 -
Prci9g0578 1034 SUPERFAMILY Calcium ATPase, transduction domain A 232 331 IPR008250 -
Prci9g0578 1034 FunFam Calcium-transporting ATPase 779 1021 - -
Prci9g0578 1034 NCBIfam calcium-translocating P-type ATPase, PMCA-type 82 1019 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci9g0578 1034 FunFam Calcium-transporting ATPase 206 333 - -
Prci9g0578 1034 Pfam Cation transporting ATPase, C-terminus 847 1017 IPR006068 -
Prci9g0578 1034 CDD P-type_ATPase_Ca_PMCA-like 140 895 - -
Prci9g0578 1034 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 668 IPR023299 GO:0000166
Prci9g0578 1034 PRINTS H+-transporting ATPase (proton pump) signature 794 819 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 PRINTS H+-transporting ATPase (proton pump) signature 614 632 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 PRINTS H+-transporting ATPase (proton pump) signature 762 778 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci9g0578 1034 Pfam E1-E2 ATPase 234 435 - -
Prci9g0578 1034 FunFam Calcium-transporting ATPase 657 807 - -
Prci9g0578 1034 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 1020 IPR023298 -
Prci9g0578 1034 SUPERFAMILY HAD-like 455 867 IPR036412 -
Prci9g0578 1034 FunFam Calcium-transporting ATPase 467 663 - -
Prci9g0578 1034 Gene3D - 164 1017 - -
Prci9g0578 1034 Pfam Cation transporter/ATPase, N-terminus 136 181 IPR004014 -
Prci9g0578 1034 Gene3D - 454 807 IPR023214 -
Prci9g0578 1034 Pfam haloacid dehalogenase-like hydrolase 454 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0578 Prci-Chr9 20234561 20238447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0578 12 1033 Primary Pumps ATPases AT3G22910 68.222 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0578 K01537 - gmx:100793918 1543.87