Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci9g0537 | ATGGTAGGATTGGAACTCATACCAGTAGGCACAATTCTGGCTGTGCTTACCAATCAGATTTTGAAAACAGCTAACGCAGCATCTGAAGTTCTTATTGAAAAAGAAATTTTTAAGGTTCTTTCACAACACTTGTACGATATTGAACCGGTGCTAAAGGAATTACAGCTTCAAGAATTGAATGAGTCTCAAGCTGCAAGAATTGCTCTGGAGTCTCTGGAAGAAGATGTGAAGAGGGCAAATAAAGTGGTTGAGAAGTACAGGAACCGGGGTCGTTTTTACTTGCTGTTTAAGTGCAGGCACATAGTTGATGAAGTTGAAGAGGTCACAAGAAGCATTGGAAAGTCCTTGTCTGTGCTATCACTTGCAAATACTGAAGTCTTATCGCGAATTTCTGATCAGGTTGATAGATTGCAAAATGAAATGCAAAGGGTAGAGTTCGAGGCATCACAATCTCAGATTCAAATAGTGGAGAGGTTGGACCAGGGCCTTAGGGAGCAGAAACAAGACCAGGCTTTTGCAAATGACATGCTTGAAGAAATTGCAAGGGCGGTTGGCGTGCCAGTCGAGCCCTCAGAGATAAGCAAAGAGTTGGCCAGCATTAGGAAAGAAAAAGAAGAAGCTGCGGACAGGAAAGAAAGAGCTGAGGTCTTCTTCTTGGAGCAGGTCATTGAGTTACTGTCCCGAGCTGATGCTGCAAGAGATTATGAAGAAGTTAAGAAACAATACTATGAAAGACTTCAGGTGATAGAGAGGTACAATTCAAGGGAAAAATATATAGAGCCGCTTAATTCTTTCCTTTGTTGTATAACTGGGACTGTTATGGTAGATCCAGTAAGCCTTTGTACGGGTACCACTTGTGAGAGATATGCCATTGAGTCTTGGTTTGACAGTGGCATGAGGACTGACCCAGAAACTAAAGAAATCCTTGAAGATACTAAGTTGAGATCTAATGTTCCTCTTAGACAATCCATAGAGGAATGGAGAGAACTTAATTACTGCCTTACAATTAGGTCCATCAGAGAAAACCTTTTATCAAGTGGTAACTTATCTGTGGAAGAATCCTTGAACCAAGTGCAGGATCTCATAAGAGAGAATTCTATAAACAAGGACTGGATTTCTATAGGAGGGCTCACAGACATGATCATCTCCATCCTTGGGAGCACTGATAATGGAGATGTAAAGATCAATATTTTGAATACTTTGAATTATGCAGTAGAAGGGCATATGAGAAACAAGGAAAAAGTATCAGAGTCTCAAGGATGGGATCACATTATTTGCTGTTTGGGAAGCGACTCAAGAATTTCAAAAGCTGCCATTGATTTGCTGCATGAGTTAATGGAAGGTCGAGCTGGTTGGAATGTGTCTTTCTGTAGAAAACTCTCTCAGCATCACAGTGCAATTTCATTCCTTGTTAACCTTCGGAAGGGTCCAGACGAGGAGTCAGCTGAGATTGCAGAAAAGATTCTGATGGAGCTTTTCGACATAGATGAGGCCAACATTTCTAGTGCTGCCAAGTTTGGCTGGTATAAACCGCTTGTTGATCGTATGGTTCAAGGCGTAGAATCTTCAAGAATATCAATGGCTAAAACCATTGTCAATATGGAGCTGAGCAATTTAAATTTGAACCTCCTTGGTGAAGGAGTTATACCTCCTTTGCTCGAAATGCTGTCTGGCAATATTGAATTAAAAGAAGTCTCATTATCTGCACTGGTTAAACTATCAGGTTCTCGTGCCAATAAAAGTATTATAGCTTCACTGGGAGGAGTTCCTATTATTCTAGAACAGATGTTCTCTCCTTCTATGCGAACTCTCATTACCATAAAATGCTCTGAAATCCTGGAGAAGCTTTCTGCTGATGATGATGGAATTGATTACTTTGTTGATAAAGAAGGGAAACAACTTGAGCTAGATTCCATTATCACCAAATTACTTGCCCTTCAGCAGAGTCCCAACTTAGCCCACAATATCCGCAAGCCTTCTTTACGTGCACTTCTTGGAATTTGCAAGTTTGAGACTGGTTTAGTCAAGAAAGCTGTCCTAGCTGCCAGTGGTGTGTCTCTAATCCTTCCCCTTCTTGATGACTCTGATTCAGAAATCAGACAGACTGCCATAAACCTTCTCTTTCTTTTCTCTCAACATGAGCCAGAAGGAGTGGTTGAATACCTCTTCAGGCCAAGGAGGCTGGAGGCTTTGGTGGGATTTCTAGAGACTGATGATAATGAAGTACAGATGGCTGCTGCTGGTTTACTAGCAAACCTACCGAAATCCGAAAAAGAGCTCACTATGAAGCTGATTGAATTGGGTGGCCTTGATGCAATCATATGCATTTTGAAAACTGGAATAATGGAAGCAAAAGAAAATGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAACATCGAGTCACAACGCGATTTGGTTAAACGTGGAATATATCCTCTGCTTGTGAATTTTCTCTCCACTGGTTCAATAACAGCTAAGGCTAGAGCTGCAGCCTTCATTGGAGATCTTTCTTTGAGCACTCCAATGCTCACAGTTTCTGCCGAATCAACAGGCTGCTGGTGTTTTAGATCATCAAGAGTTCCTTTGTGCCCAGCACATAGTAGTGTATGCAGTGTGAGCAACACATTTTGTCTCTTGGAAGCAAAAGCTTTACCTGGTTTGGTGAATCTCTTATGTGGGGAGGTTGATGTAACTGCTTATGAAGCAATACAGACACTTTCAACATTGGTTTTAGAAGATTATCCTCAAAGGGGAGCACGTGTTTTGCACGAATGGAACGCTATAAAACCGCTTCTAGATATTCTGACATGGGGGTCTGATTCTCTGAAGGCTGAGGCTCTAGGACTCTTAGAGAAGGTCTTTGTATCAAAGGAAATGGTGGAATCCTACGGCGTAACAGCTAGATCACGTCTGGTTGGTTTGACGGGGATGAATATTTATGGAGATGGCCATCTCAGAAGAAAAGCTGCTAAGGTATTGTCATTGATTGAACGGTATTCAAGGTCATCATCTGCTGCTGTTTCAGGAGTTCTAGAGTGA | 3045 | 0.4174 | MVGLELIPVGTILAVLTNQILKTANAASEVLIEKEIFKVLSQHLYDIEPVLKELQLQELNESQAARIALESLEEDVKRANKVVEKYRNRGRFYLLFKCRHIVDEVEEVTRSIGKSLSVLSLANTEVLSRISDQVDRLQNEMQRVEFEASQSQIQIVERLDQGLREQKQDQAFANDMLEEIARAVGVPVEPSEISKELASIRKEKEEAADRKERAEVFFLEQVIELLSRADAARDYEEVKKQYYERLQVIERYNSREKYIEPLNSFLCCITGTVMVDPVSLCTGTTCERYAIESWFDSGMRTDPETKEILEDTKLRSNVPLRQSIEEWRELNYCLTIRSIRENLLSSGNLSVEESLNQVQDLIRENSINKDWISIGGLTDMIISILGSTDNGDVKINILNTLNYAVEGHMRNKEKVSESQGWDHIICCLGSDSRISKAAIDLLHELMEGRAGWNVSFCRKLSQHHSAISFLVNLRKGPDEESAEIAEKILMELFDIDEANISSAAKFGWYKPLVDRMVQGVESSRISMAKTIVNMELSNLNLNLLGEGVIPPLLEMLSGNIELKEVSLSALVKLSGSRANKSIIASLGGVPIILEQMFSPSMRTLITIKCSEILEKLSADDDGIDYFVDKEGKQLELDSIITKLLALQQSPNLAHNIRKPSLRALLGICKFETGLVKKAVLAASGVSLILPLLDDSDSEIRQTAINLLFLFSQHEPEGVVEYLFRPRRLEALVGFLETDDNEVQMAAAGLLANLPKSEKELTMKLIELGGLDAIICILKTGIMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVNFLSTGSITAKARAAAFIGDLSLSTPMLTVSAESTGCWCFRSSRVPLCPAHSSVCSVSNTFCLLEAKALPGLVNLLCGEVDVTAYEAIQTLSTLVLEDYPQRGARVLHEWNAIKPLLDILTWGSDSLKAEALGLLEKVFVSKEMVESYGVTARSRLVGLTGMNIYGDGHLRRKAAKVLSLIERYSRSSSAAVSGVLE | 1014 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci9g0537 | 1014 | SUPERFAMILY | RING/U-box | 248 | 330 | - | - | |
| Prci9g0537 | 1014 | Coils | Coil | 127 | 154 | - | - | |
| Prci9g0537 | 1014 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 547 | 588 | IPR000225 | GO:0005515 | |
| Prci9g0537 | 1014 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 726 | 753 | IPR000225 | GO:0005515 | |
| Prci9g0537 | 1014 | CDD | MLKL_NTD | 10 | 145 | - | - | |
| Prci9g0537 | 1014 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 11 | 1006 | - | - | |
| Prci9g0537 | 1014 | SUPERFAMILY | ARM repeat | 546 | 956 | IPR016024 | - | |
| Prci9g0537 | 1014 | Coils | Coil | 62 | 89 | - | - | |
| Prci9g0537 | 1014 | Gene3D | - | 858 | 1007 | IPR011989 | - | |
| Prci9g0537 | 1014 | SMART | arm_5 | 915 | 957 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci9g0537 | - | - | gmx:100783638 | 1501.49 |
Showing 1 to 1 of 1 entries