Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0517 ATGGAACCAGGCGTCCCTTCACCGCCGCGATTTCCGTCACCTCCGGCCTCACCTTTACCCTCTTCCGCCGTCACCATTCTCGGAAAATATCAATTGATTCGTCTTCTAGGTCGTGGCAGTTTCGCCAAGGTCTACCAAGCTCGATCCTTAATCGACGGCTCCATTGTCGCCGTGAAGATTATTGACAAGTCAAAAACCGATGCATCCATGGAGCCTCGGATTGTCCGTGAGGTTGATGCCATGCGACGCCTTCATGACCATCCTCATATTCTCAAAATCCATGAGGTCTTGGCTACGAAGACGAAGATCTACCTGATAGTGGAGTTCGCTGCCGGCGGGGAGTTATTCTCGAAAATCTCGCGTAAAGGCCGGATGACAGAGCCGGTGGCGCGGCGTTACTTTCAGCAATTGGTCTCTGCCTTGTGTTTCTGCCACAAAAACGGCGTCGCACACCGTGATGTGAAGCCACAGAATCTTCTCTTGGACCACGAAGGGAATCTAAAGGTCTCGGATTTCGGACTCTCCGCCTTGCCCGAACAGCTCAAGAACGGGTTGCTCCAAACGGCTTGCGGCACGCCGGCTTACACGGCGCCTGAGATCCTCTTCCGGCGCGGATACGACGGCTCGAAAGCCGACGCGTGGTCGTGCGGGCTGATACTCTACGTCCTCCTCGCTGGCTATCTCCCCTTCTCCGACGCAAATATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACCAGTTCCCGGAGTGGATATCCAAGCCGGCGCGGTTCGTGATTAACCGACTTCTCGACCCGAACCCGAAAAACCGGATGAGCCTAGAATCTCTATACCAAAATTCGTGGTTCAAGAAATCGCTCAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCGACGGCGAAATCTTACCAGAAGCTCGAAAGGATGGGTTCTGGCGTCAACGCGTTCGACATAATCTCCATGTCGTCAGGTCTGGACCTGACGGGTTTGTTCGAAACGGCGTCGGGTACCAACTACAGGAGAGAAAAGAGATTCACATCGAATGCTTCGTTACAAGTAGTAGAAGAGAAAGTGAAGGAATTAGGAGGAATTTTAGGGTTCAAGGTCGAGATAGGCAAAAATGGAGCTATTGGGTTAGGGAAAGGCAAGGTGATTCTTGTGGTTGAGGTTTTTGAGATCGTGACTGAGTTGTTGATGGTCACTGTGAAAGTGATCAATGGTGGTTTTGAGTTTGATGAGCTTCACTGGGGAAACTGGAAATCTGGGCTTCAAGATCTTGTTCTTTCATGGCACAATGAATCACTGTGA 1317 0.5178 MEPGVPSPPRFPSPPASPLPSSAVTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKSKTDASMEPRIVREVDAMRRLHDHPHILKIHEVLATKTKIYLIVEFAAGGELFSKISRKGRMTEPVARRYFQQLVSALCFCHKNGVAHRDVKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLQTACGTPAYTAPEILFRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLDPNPKNRMSLESLYQNSWFKKSLKPQPDESLFESGPTAKSYQKLERMGSGVNAFDIISMSSGLDLTGLFETASGTNYRREKRFTSNASLQVVEEKVKELGGILGFKVEIGKNGAIGLGKGKVILVVEVFEIVTELLMVTVKVINGGFEFDELHWGNWKSGLQDLVLSWHNESL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0517 438 Pfam NAF domain 316 373 IPR004041 GO:0007165
Prci9g0517 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Prci9g0517 438 Gene3D Transferase(Phosphotransferase) domain 1 22 316 - -
Prci9g0517 438 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0517 438 CDD CIPK_C 317 427 - -
Prci9g0517 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 406 - -
Prci9g0517 438 CDD STKc_AMPK-like 29 283 - -
Prci9g0517 438 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0517 438 Gene3D Kinase associated domain 1, KA1 317 431 - -
Prci9g0517 438 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Prci9g0517 438 FunFam Non-specific serine/threonine protein kinase 21 312 - -
Prci9g0517 438 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Prci9g0517 438 SMART serkin_6 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0517 438 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Prci9g0517 438 FunFam Non-specific serine/threonine protein kinase 23 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0517 Prci-Chr9 18590200 18591978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0517 15 435 CBL-interacting serine-threonine protein kinases AT4G14580 58.411 2.59e-165 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci9g0517 Pkinase 3.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0517 K12761 - qsa:O6P43_021501 626.32