LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci9g0511	ATGTGTGTAAATATCTACAGGGCAAGGACGATACACTTGAGCATCAGCACCACCGGGAAGTGTTGTATAAGCGTGCCTTTCCTGCGATTCCCTCCTCATTTATTTCATCGCTCCATTCCTTTCAAACGCATCTCTTCGCTCACAAAAAGATTTCTGGTAGCTTTAGCAATGGATGGTCCAAAAGCTGGTGCACCTAAGGAAATGCCACTGGGTTTTGATGATACGACTGAGGAAGAATATGCTTCTCAGTCTAGTTTACTTCAAGAATTCAATAGTATCTCCAACATTGACAACGCATGGATTTTTAATTCTGACAGTGCACTCGCCTCTCAGGGAATGTTTTGTATTAGCCAACCAAATCTTCTCACAAACAAGAGAAAGAAGTTCATACTATCCTCTACAATATTTAAGGAAAGTAACAGCTCTGTAAAATTTCACTGGGCTCCATTTCCCATAGAGATGTCTGGAGCATCTAAAGTTGTTCCATCACCTTCTGGCTCAAAACTTCTGGTAGTTCGAAATCCTGAGAACGAAGGTCCTTCTCACCTTGAAATATGGAATTCATCTCACTTGGAAAAGGAATTCCATATCCCCCAGTTAGTGCATGGCTCAGTATATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTTGGATGAAACTTGTATAGCATATGTAGCTGAAGAGCCATCCCCTGCAAAGCCTAATTTCAATGATCAGGGCTACAAGAAAGGTGGTTTGACAGATAAGGACAGTGGTAGCTGGAAAGGTCAAGGGGATTGGGAGGAGAACTGGGGAGAAACATATGCAGGAAACAGGCAACCTGCACTTTTTGTTATAAGCATCAAAAGTGGAGAGGTACAACCTGTTAAAGGAATCGACAAATCTTTGAGTGTTGGACAAGTTGTGTGGTCTCCATCAACTGAAGGCTCAGCACAATATTTAGTATTCGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATGAAGTACTGTTACAACAGACCTTGCGCATTATATGCTGTTAAAGCCCCACACCATGAGTCAAATGCTAATGAAACAGAGAATCACTCAACTGAAGATTTCCAGGCAGTAAACCTAACCTGGACTATAAATAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGGAAGTTCCTTGTGTTTTTATCTGCAAAATGTTCAGTGGATTCTGGAGCCCACTCTGCAACAAATTCACTCCATAGAATTGATTGGCCCACTGACTTGAAGGATTACAAATCTTTTGAAGTTTATGACGTGATCCCTGTTGTGATGTGCGCTGAGGATGGTTGCTTCCCTGGGCTTTACTGTTCAGCTGTCCTTTCTAATCCTTGGCTTTCTGATGGATGCACTATGATTTTACCGTCTGTTTGGCATAGCTGTCAAGTTTTACTTTCAGTGAACGTGTTGAGTGGAGAAGTATCAAGGATCACCCCTGCTGACTCAAATTTCTCATGGGGTCTTCTTGCATTAGATGGGAACAATATTCTTTCTGTTTTGAGCAGTCCAGTAGATGTTCCTGAAATCAGTTATGGCACCATTATTGAGAAGGAAAATGATGCTAAGGCTTGGAGTTGGTCAAATGTATCAAGTCCCATATTCAGATGCTCTGACAAGGTCAGATCCTTGCTGTCCTCTCTTCAGTTCAGTGTAATGAAAATCTCCGTGAAAGTTGCTTCTGATAACCTAACCAAAGGTGCTAGGAAGCCTATTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAATGATACATGCGATCCACTAATTGCAATCCTTCATGGGGGACCCCACTCTGTCTCTTTGTCAAGTTTTTCAAAGTCACTGGCTTTCTTATCTTCTCTTCGATATAGCTTGTTGATTGTAAATTACAGAGGTTCAATAGGATTTGGCGAGGACGCATTACAATCTCTCCCTGGAAAAGCTGGTTCTCAGGATGTTGATGATGTAATCACTGCCATAGATCATGTCATTAACTTAGGACTTGCCAGTCCATCAAAGATCGCAGTGCTGGGTGGTTCGCATGGTGGGTTTCTGACAACCCACCTGATTGGCCAGGCACCAGAGAAGTTTGTTGTGGCAGCTGTGAGAAACCCTGTTTGTAACCTTTCATTGATGGTTGGTATAACTGACATCCCTGACTGGTGCTATGTGGAGTCCTATGGGATAGCCGGGAAGGATAGGTATACAGAAGCACCTTCAGAGGAGGATCTCACTCTATTTTACAGCAAGTCTCCTATTGCATATCTCTCAAAGGTAAAAACACCAACGCTTTTCCTATTAGGTGCTCAAGATCTTCGTGTTCCAGTTTCTAATGGATTGCAATATGCAAGGGCCCTAAAGGCCAAAGGAGTTGACACCAAAATAATAGTGTTTCCCAATGATGTTCATTCAATTGACAGGCCACAATCTGACTTTGAAAGCTTCATTAATATTGGGGTATGGTTCAAGAAGTATTGTAAATGA	2484	0.4207	MCVNIYRARTIHLSISTTGKCCISVPFLRFPPHLFHRSIPFKRISSLTKRFLVALAMDGPKAGAPKEMPLGFDDTTEEEYASQSSLLQEFNSISNIDNAWIFNSDSALASQGMFCISQPNLLTNKRKKFILSSTIFKESNSSVKFHWAPFPIEMSGASKVVPSPSGSKLLVVRNPENEGPSHLEIWNSSHLEKEFHIPQLVHGSVYTDGWFEGISWNLDETCIAYVAEEPSPAKPNFNDQGYKKGGLTDKDSGSWKGQGDWEENWGETYAGNRQPALFVISIKSGEVQPVKGIDKSLSVGQVVWSPSTEGSAQYLVFVGWSFETRKLGMKYCYNRPCALYAVKAPHHESNANETENHSTEDFQAVNLTWTINSAFFPRFSPDGKFLVFLSAKCSVDSGAHSATNSLHRIDWPTDLKDYKSFEVYDVIPVVMCAEDGCFPGLYCSAVLSNPWLSDGCTMILPSVWHSCQVLLSVNVLSGEVSRITPADSNFSWGLLALDGNNILSVLSSPVDVPEISYGTIIEKENDAKAWSWSNVSSPIFRCSDKVRSLLSSLQFSVMKISVKVASDNLTKGARKPIEAIFVSSKTKKNDTCDPLIAILHGGPHSVSLSSFSKSLAFLSSLRYSLLIVNYRGSIGFGEDALQSLPGKAGSQDVDDVITAIDHVINLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVVAAVRNPVCNLSLMVGITDIPDWCYVESYGIAGKDRYTEAPSEEDLTLFYSKSPIAYLSKVKTPTLFLLGAQDLRVPVSNGLQYARALKAKGVDTKIIVFPNDVHSIDRPQSDFESFINIGVWFKKYCK	827

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci9g0511	827	SUPERFAMILY	alpha/beta-Hydrolases	586	826	IPR029058	-
	Prci9g0511	827	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	73	826	-	-
	Prci9g0511	827	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	76	349	IPR045550	-
	Prci9g0511	827	ProSitePatterns	Prolyl endopeptidase family serine active site.	655	685	IPR002471	GO:0004252\|GO:0006508
	Prci9g0511	827	MobiDBLite	consensus disorder prediction	236	259	-	-
	Prci9g0511	827	Gene3D	alpha/beta hydrolase	521	825	IPR029058	-
	Prci9g0511	827	SUPERFAMILY	DPP6 N-terminal domain-like	157	492	-	-
	Prci9g0511	827	FunFam	Acylamino-acid-releasing enzyme	566	826	-	-
	Prci9g0511	827	Pfam	Prolyl oligopeptidase family	610	826	IPR001375	GO:0006508\|GO:0008236

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci9g0511	Prci-Chr9	18564492	18576700	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci9g0511	594	810	Carbohydrate Esterase	AT5G36210	25.114	5.73e-16	80.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci9g0511	K01303		-	qsa:O6P43_021499	1216.45

Showing 1 to 1 of 1 entries