Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0495 ATGGAAAGCAAAGTGGGTTATGAGAATGATCTGAATCACAAGGATACAGAGCTCAGATTAGGGTTGCCAGGAAGGGAAGAAGAGCAAGGATCACTGGTTAGCTCTAAGAACAATAACAACAAGAGGCCTTTATCTGAAGAAGCCTCTGAGAATTGTGGAACAAAGGGTTCTGATTCCAATGAATCAGCCCCTCCCGCCAAGGCAAAGATTGTGGGGTGGCCACCAATCAGATCTTACAGGAAGAACAGTATTCAGGAGGCTGAGGCATCTGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCATACCTTAGAAAGATTGATCTGAAGGTTTACAATGGCTATCCTGAACTCCTCAAGGCTCTAGAGAACATGTTCAAGTTAACCATAGGTCAGTACAATGAAAGAGAGGGTTACAAAGGATCAGAATATGCACCTACATATGAGGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGATATGTTCATGACTACCTGCAAAAGATTGAGAATCATGAAAGGATCAGAAGCTAGAGGATTGGGTTGTGCAGTATGA 567 0.4356 MESKVGYENDLNHKDTELRLGLPGREEEQGSLVSSKNNNNKRPLSEEASENCGTKGSDSNESAPPAKAKIVGWPPIRSYRKNSIQEAEASGIYVKVSMDGAPYLRKIDLKVYNGYPELLKALENMFKLTIGQYNEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFMTTCKRLRIMKGSEARGLGCAV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0495 188 ProSiteProfiles PB1 domain profile. 91 178 IPR000270 GO:0005515
Prci9g0495 188 FunFam Auxin-responsive protein 86 188 - -
Prci9g0495 188 MobiDBLite consensus disorder prediction 1 68 - -
Prci9g0495 188 Gene3D - 85 188 - -
Prci9g0495 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 182 IPR003311 GO:0005634|GO:0006355
Prci9g0495 188 MobiDBLite consensus disorder prediction 30 61 - -
Prci9g0495 188 SUPERFAMILY CAD & PB1 domains 82 177 - -
Prci9g0495 188 MobiDBLite consensus disorder prediction 1 24 - -
Prci9g0495 188 Pfam AUX/IAA family 48 185 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0495 Prci-Chr9 18436795 18438442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0495 54 184 B3 DNA Binding Superfamily AT2G46530 30.534 3.73e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci9g0495 AUX_IAA 1.1e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0495 K14484 - rcu:8280180 283.493