Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0494 ATGGCAAGTTTGAATCTGAAGGAGACAGAGCTGTGTCTGGGATTACCGGGCGGCGGCGGCGGCGGTGCTGATGGCTGCGAGGCTGAAACCGCCACTCCGAAGGCCTCATCAGGAAACAAGAGAGCCTTCTCTGCAACTGTTAATCTCAAGCTCAACCTCGTCGATGATTCCAAGGTTGTCGACGGTGAGGAACAAGATCTCATGAATCAGAACCTCAACAACACTATCACCTCCAAGAAGGACCCCACTAAGCCACCTGCTAAGGCACAAGTGGTGGGTTGGCCACCAGTGAGGTCATACAGGAAGAACTTGATGACACAAAAGGAGAGCAGTGAAGATGGAAATACCGATAAGAAGAAGGCGGCGGCGGTGCCGACTTCAACTCCGGTGATGACCGGAGGATCATTTGTGAAGGTGTGTATGGATGGTGCACCCTACCTTAGGAAGGTGGACTTGAAGATGTACCAAAGCTATCAACAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACTACCATGGGAAAATATGAGGGGGCCCAAGGTATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGTTCTGAATATGTGCCAACTTATGAAGATAAGGATGGTGATTGGATGCTTGTTGGAGATGTCCCTTGGGTGATGTTCGTTGATTCATGCAAGCGTCTTCGAATAATGAAAGGTTCAGAAGCCATTGGATTGGCCCCAAGAGCCATGGAAAAATGCAAAAGCAGAAGCTGA 765 0.4902 MASLNLKETELCLGLPGGGGGGADGCEAETATPKASSGNKRAFSATVNLKLNLVDDSKVVDGEEQDLMNQNLNNTITSKKDPTKPPAKAQVVGWPPVRSYRKNLMTQKESSEDGNTDKKKAAAVPTSTPVMTGGSFVKVCMDGAPYLRKVDLKMYQSYQQLSDALAKMFSSFTTMGKYEGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWVMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0494 254 SUPERFAMILY CAD & PB1 domains 129 235 - -
Prci9g0494 254 MobiDBLite consensus disorder prediction 105 126 - -
Prci9g0494 254 MobiDBLite consensus disorder prediction 16 38 - -
Prci9g0494 254 Gene3D - 130 248 - -
Prci9g0494 254 Pfam AUX/IAA family 8 245 IPR033389 -
Prci9g0494 254 MobiDBLite consensus disorder prediction 105 119 - -
Prci9g0494 254 FunFam Auxin-responsive protein 130 246 - -
Prci9g0494 254 ProSiteProfiles PB1 domain profile. 134 236 IPR000270 GO:0005515
Prci9g0494 254 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 241 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0494 Prci-Chr9 18397961 18400636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0494 135 244 B3 DNA Binding Superfamily AT4G23980 30.909 2.15e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci9g0494 AUX_IAA 8.3e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0494 K14484 - mnt:21399382 311.227