Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0457 ATGGAAGACACTACTCACCATCGTCGTCGTCATCATCATCAAGAAGAAGAGGTAGAATATTATGGCTCTAAAGGCTCAATCAAACGATCCTACTATGGATGCTCATTCTGCAAACAAGGCTTCACGAACGCACAAGCATTAGGAGGTCACATGAACATTCACAGAAAACACAGACTAATCACAAAGAAAGCCAAGGACGATGAAGAAGAAGCTGCTGCGACGACGATGACAAAGACGAAGAAGACGAAGACCGCGAAATCTTCCATGGACAACAAAGATAAGTTATTGAATAACGATGAGTTTCTCAGGTATTACGGTTCCATTTTCCAGCATATAAACCCTATGTGGTCTCATCAGTCATTGAATGTGAATATTGGTCCAGCTCGTCATGAGGACGTTAATGGCGATAGATCAGTGAATCATCAGGAAGATGGTCAAGAAATAGTGGTGGACTTAGAACTCAGACTAGGTCGCGATCCATCATGCTAA 489 0.4254 MEDTTHHRRRHHHQEEEVEYYGSKGSIKRSYYGCSFCKQGFTNAQALGGHMNIHRKHRLITKKAKDDEEEAAATTMTKTKKTKTAKSSMDNKDKLLNNDEFLRYYGSIFQHINPMWSHQSLNVNIGPARHEDVNGDRSVNHQEDGQEIVVDLELRLGRDPSC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0457 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Prci9g0457 162 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Prci9g0457 162 Gene3D Classic Zinc Finger 14 95 - -
Prci9g0457 162 PANTHER OS07G0101800 PROTEIN 27 160 - -
Prci9g0457 162 MobiDBLite consensus disorder prediction 63 91 - -
Prci9g0457 162 SUPERFAMILY beta-beta-alpha zinc fingers 29 59 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0457 Prci-Chr9 17345914 17346402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0457 20 158 C2H2 Transcription Factor Family AT3G09290 31.013 5.70e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0457 - - pcin:129319613 285.419