Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0456 ATGTTTAAAACAATAGCATCTGGACTTTCAATTTTGTTTCTCCTCAAATGCGTATCTGCAACAGATAATGTGTTTCCCAGATGTAACTGTGACGATGAGGCCAGCTTGTGGACTATTGAGAGTATTCTGGAGTGCCAAAGAGTCAGTGATTTGTTGATTGCTGTGGCCTACTTCTCCATACCCATTGAGCTGCTTTGTTTTATCAGCTGTGCGATTGTTCCATTCAAATGGGTTCTTGTTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGCATGGACTTATGGTCCTCACTCTTTCCAGCTGATGGTGGCACTTACAGTATTTAAAACTCTTACAGCTTTGGTATCATGCGCCACTGCTATTACTCTTATGACTCTCATTCCTTTACTACTTAAAGTGAAGGTCAGGGAATTAATGCTGAGGAAAAAGACCTCTGAACTTGGACGAGAGGTTGGTATTATTTTGAGGCAGAAGGAAGCTGCAAAACATGTAAGGATGCTCACTCGAGAGATTCGCAAGTCACTTGATAGGCATACTATTTTGTATACCACCTTGGTGGAGCTGTCTGAAACACTTGGTTTGCAAAATTGTGCTGTCTGGATGCCTAATTTTGATAAAACAGAGATGAACCTCACTCATGAATTGAATGGGAGGAATCTTAATTTTTCTATACCCATTACGGATCCAGATGTTGTGAGAATCAAGGCTAGTGATGGAGTAAATATTCTTAGCCCTGTCTCAGCACTTGCTGCTGCCAGTAGCGGAATTTCTTCTGAGGCAGGACCAGTGGCTGCAATTCGGATGCCGATGCTTCGGATTTGCAATTTCAAAGGTGGAACTCCTGAGGGAAGGCAGCTATGTTATGCAATATTGGTTCTGATTCTTCCTGGTGGAGAGCCAAGATCTTGGAGGAATCTGGAGCAAGAAATAGTTAAAACAGTTGCTGATCAGGTTGCTGTGGCTCTCTCTCATGCTGCAATCCTTGAAGAGTCACTCATGAGAGAGCAATTGGAGGAGCAAAATCGAATTCTACAACAGGCACAAAGGAATGCTTTGATGGCGAGTCAGGCAAGAAACTTATCTCAGAAGGTCATGAGTGATGGAATGAGAAGACCAATGCACTCAATTTTGGGTTTGCTTTCAATTATTCAAGATGAGAATATGAAAAGCGAACAGAAACTCATTGTGGATGCGATGCTGAGAACTAGCAATGTCCTATCAAACTGGATAAATGATGCCATGAACATTTCAGCCAAGGATGATGGGGGATTTCCATTGGAGATGAGATCTTTTGGGTTACGTGCCATAATAAAAGAAGCAGCATGTCTTGCTAAGTGTCTTTGTGTTTATAGGGGCTTTGGTTTTAAAATTGAGTGTGAAAAGTCTTTGCCTGACAACGTTATGGGTGATGAGAGAAGGGTCTTTCAGGTGATTCTACATATGATTGGGAACTTATTGGATGGTAATCACCGAGGAGGGATTCTTGTACTTCGTGTATTCACAGAAAGAGGAAGTCAGGAAAGAATTGACCATGGGCGGACAACCTGGAGACCAAGCTCATCTAGTGGGGATGTACATATTAGATTTGAGATAGGGATCAAGAGAGGCAATTATGAGTTGGAGAGTTCACTTTCTTTAGAAGTTGGTGGTAGGAAATATTCTAGTTGTAGGGATGAAATCAGGTTGAGCTTCAGCATTTGCAAGAGGATAGTTCAGTTGATGCAAGGGAATATATGGTTTGTACCAAATACATTAGGTTTTCCTCAAACCATGGCCCTCGTTCTTCGGTTTCATTTACGACCATCCATTTCTATTTTCATCTCTGAGCCTGGTGAATCCTCTGAGCGCACAGATTCTAATTCTCTGCTCAGAGGTCTGCAAGTCTTGTTGGCTGACAATGATGATGTAAATAGAGCTGTGACACAAAAGTTGCTTCAGAAGCTCGGTTGTGTCGTAATCTCAGTTTCTTCAGGATTTGAATGCCTTGCTGTCATTGGACCTAGTGGATCTTCCATTCAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTTGCCACAAGGATTCAAAAATTTAGAAGCCGAAATTGGCCAGTGATTGTCGCCTTGACTGCAAGTGCCGATGAAGATTTGTGTGAAAGATGTATGCAAATTGGTATCAATGGAGTTATAAGAAAACCTGTTATGTTGCAGGAAATTGCCGGTGAACTTAGGAGGATCCTGATGCATGCAAGGAAATGA 2271 0.4179 MFKTIASGLSILFLLKCVSATDNVFPRCNCDDEASLWTIESILECQRVSDLLIAVAYFSIPIELLCFISCAIVPFKWVLVQFIAFIVLCGLTHLLNAWTYGPHSFQLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLRKKTSELGREVGIILRQKEAAKHVRMLTREIRKSLDRHTILYTTLVELSETLGLQNCAVWMPNFDKTEMNLTHELNGRNLNFSIPITDPDVVRIKASDGVNILSPVSALAAASSGISSEAGPVAAIRMPMLRICNFKGGTPEGRQLCYAILVLILPGGEPRSWRNLEQEIVKTVADQVAVALSHAAILEESXLMREQLEEQNRILQQAQRNALMASQARNLSQKVMSDGMRRPMHSILGLLSIIQDENMKSEQKLIVDAMLRTSNVLSNWINDAMNISAKDDGGFPLEMRSFGLRAIIKEAACLAKCLCVYRGFGFKIECEKSLPDNVMGDERRVFQVILHMIGNLLDGNHRGGILVLRVFTERGSQERIDHGRTTWRPSSSSGDVHIRFEIGIKRGNYELESSLSLEVGGRKYSSCRDEIRLSFSICKRIVQLMQGNIWFVPNTLGFPQTMALVLRFHLRPSISIFISEPGESSERTDSNSLLRGLQVLLADNDDVNRAVTQKLLQKLGCVVISVSSGFECLAVIGPSGSSIQVILLDLHMPELDGFEVATRIQKFRSRNWPVIVALTASADEDLCERCMQIGINGVIRKPVMLQEIAGELRRILMHARK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0456 757 CDD HATPase_ETR2_ERS2-EIN4-like 470 602 - -
Prci9g0456 757 Gene3D - 428 605 IPR036890 -
Prci9g0456 757 SUPERFAMILY GAF domain-like 185 331 - -
Prci9g0456 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 590 IPR036890 -
Prci9g0456 757 Coils Coil 334 337 - -
Prci9g0456 757 CDD REC_ETR-like 633 748 - -
Prci9g0456 757 Pfam GAF domain 182 328 IPR003018 GO:0005515
Prci9g0456 757 Gene3D - 633 757 - -
Prci9g0456 757 SMART gaf_1 182 338 IPR003018 GO:0005515
Prci9g0456 757 FunFam Ethylene receptor 4 331 425 - -
Prci9g0456 757 Coils Coil 339 364 - -
Prci9g0456 757 FunFam Ethylene receptor 631 755 - -
Prci9g0456 757 SMART REC_2 633 748 IPR001789 GO:0000160
Prci9g0456 757 Gene3D - 161 329 IPR029016 -
Prci9g0456 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 755 - -
Prci9g0456 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Prci9g0456 757 Pfam Response regulator receiver domain 635 745 IPR001789 GO:0000160
Prci9g0456 757 SUPERFAMILY CheY-like 631 752 IPR011006 -
Prci9g0456 757 Gene3D - 330 427 - -
Prci9g0456 757 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0456 Prci-Chr9 17293592 17298330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0456 22 755 Miscellaneous Gene Families AT3G04580 56.971 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci9g0456 GAF 4e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0456 K14509 - gmx:100787425 1172.92