Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0455 TCCGTCGTCGTGGTCTTCTTCTTTCTTTCTTTGTTTCGTTCAATTATTACCTTAACCTATCGTCAGCTAGCAATTCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCTGGTGTTGACCCAGCGGCCAATTCACCGGCGGTGAACAAACGGCGCAACACCGACCTATCTATCAACGAATTAAGCAGCGGGAAGAACAGTGCCGGCGATAACAGAGACGAAGACGATGATAGAGACGAACCCAAAGAAGGTGCAGTTGAGGTCGGAACTCGCAGACCTCGAGGCCGGCCACCGGGTTCGAAGAACAAGCCGAAACCGCCCATCTTCGTGACACGAGACAGCCCAAATGCTCTCCGGAGCCACGTCATGGAGGTCGCCGGAGGATCCGATGTAGCCGAAAGCGTAGCTCAGTTCGCTCGCCGCCGTCAACGTGGCGTTTGTGTTCTCAGTGGAAGTGGCTCCGTTGCCAACGTCACTCTTCGTCAACCTGCAGCTCCCGGAGCTCTTTTAGCACTCCATGGAAGGTTCGAGATTCTATCCCTAGCCGGAGCCTTCTTGCCTGGACCGGCGCCACCCGGATCCACTGGACTCACCGTATACCTCGCCGGAGGACAGGGTCAGATCGTGGGCGGAAGCGTGGTGGGGTCACTAGTAGCAGCAGGACCAGTGATGGTCATTGCTGCCACTTTTGCTAATGCAACTTATGAGAGACTTCCTCTTGATGATGAAGATGAAGCCGCGGCCGCAGGGCAAGGCGGAGGCAGCAGCGGAGGTGGAGGCTCGTCCCCGCCACCGGCGGGGATCGGAAGTGGCGGGGGCCACTTGCAGGGTGGGATTCCAGATCCTTCATCACTTCCTTTGTATAATCTGCCACCAAATCTGCTTCCTAATGGTGGTGGTAGTGGACAGGTAGGTCATCATGAAGCTCTTGCTTGGGCAGCTCATGGAAGACAACCTTACTAG 966 0.5631 SVVVVFFFLSLFRSIITLTYRQLAILANPWWTGQVGLPGVDPAANSPAVNKRRNTDLSINELSSGKNSAGDNRDEDDDRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGSDVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGALLALHGRFEILSLAGAFLPGPAPPGSTGLTVYLAGGQGQIVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEAAAAGQGGGSSGGGGSSPPPAGIGSGGGHLQGGIPDPSSLPLYNLPPNLLPNGGGSGQVGHHEALAWAAHGRQPY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0455 321 ProSiteProfiles PPC domain profile profile. 116 253 IPR005175 -
Prci9g0455 321 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 245 - -
Prci9g0455 321 CDD DUF296 120 231 IPR005175 -
Prci9g0455 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 66 314 IPR014476 GO:0003680
Prci9g0455 321 MobiDBLite consensus disorder prediction 246 303 - -
Prci9g0455 321 Gene3D - 119 247 - -
Prci9g0455 321 FunFam AT-hook motif nuclear-localized protein 119 246 - -
Prci9g0455 321 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 232 IPR005175 -
Prci9g0455 321 MobiDBLite consensus disorder prediction 48 67 - -
Prci9g0455 321 MobiDBLite consensus disorder prediction 44 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0455 Prci-Chr9 17212123 17213411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0455 26 321 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.596 5.88e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0455 - - gmx:100798994 338.576