Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0434 ATGGCTTCATCTTTGGAGGAACTTCTGGCAGAAGAAGGATTCAAGGGAAGTAGAAGAATCGCAAGGACCAGATCTTCCCTCCAGTCTAATCCTGTAACCAAGCCCCATTACTCTATCATTGACCAAGAAAAGAGACTTTCTGTATCAGATGACAGAATTAGAGCGGAGAGAACAAAATCTTATGCCTCACAATGTCGGATTGGAGATAATAGAGATACTGCTCAGAGCTGGAGACCAAGGGATAATCTTGCTGAAAGAGATAAATTGGATGAAGGATTGAAGAATGAAAATGTTGAGAAATCTTCCAGCAACACGAAGTTAAGTAAAAACCATGACAGCAAAACATCAGCACGCATACCTAGGAAAGAGATAATTGAAGTGGGTGAGCAAAAAGATAATAGAGTTAAAGATATATATTCCAATGAATTGTTGATTGCAAATAGAGGGAAAGAAAAAGATTTCATTGATTTCAGGTATAGGGAGAAGTGGCATGGGACGCTGGTCAAGGATGCAAAGTTGGATAAGAGGCATGGCAGCAGTTCTAGCACACTTATGGTTGGACAGTTGAGTGGAAATACAAGGAAGAATATAAAGCAACAAGACAGGTCACGCAGTAGATCAATTAGCGGAAGCTTTGAAAATAGTTATAATAAAAAGCATGGTCTTGCAACGCAGACACCTGCTGATCTAGCTCTTGATGAAGTTGCTGTACAAGCAGTTGTTTCTATTCTCAATGGTTATATAAAACGCTTTCTAAAAGATGAAGATTTTCGGACTACAATCCATCACAATTGTTTTTCTTCCTTGAATTTCATTGAACTGGAAGACGAGAACGGTACTGAGACCAAAGTCATAAGAAGTCTTGAACAAGCTATTGATACAATAGAAGAAGCTGCCAAGGAGTCTGTATCTCAAAAAGAATTGAAAAGGACCTCTTTGCAGCTAAGCATTATTACAGGTCTAAGCTTAAATGATTTGAAGTATGGTATTACATGTGGGATTCCAAATTATAAGTTGTCAGCCTGTGCTCATCTTTACCTCAGTGTTGTATATAAGATACAGAGAAAGGATAAGATATCAGCGAAGCATCTTTTGCAAGTATTTTGTGATTCACCTTCTCAGGCGCGGACAACATTGCTGCCTGAATTGTGGGAGTACTTATTTTCTCCACATCTTTCTCATTTGAAGGCATGGTACAACAGGGAAGTTCATATTCTAGTTGATATGCCAAGCAAAACGAGAAAAATAAAGCATCTTGAAAAGGTGTATAATGAGCATTTGGATTCTGGGACTTATTCATTTGCTGTATACTACAAAGACTGGCTCACCGAAGGCGCAGAAGCTCCGTCAGTTCCTTCTGTCACCATTCCATCAATATCTGCTTTAGAAAGTCGGCTAGGAAGTTCCCTTGGTCATTCTTCTGAATTGGCTTCGTCTGTTGATTCGTTCTCACCACAGCCAATGGTCAGCAAAAAACTGTATGATTCTGTCTTTGGTAGCTCGAGTAAAGCTGGAGTGGAAGAGGAGGAAGAGCATACAATGGAAGATAACTTAGAGAGCTGCATGAGACACTCACACGGTTCATCTATTGCTGAACAAAAATTAACGTTTGTCTCTGAAGTGGTTAAATATACAGATGAAGATACTGAAGAAGATTTTAATAAGATGACACTTGCTATTGAGCGCCATACTAAGGGAACCTCAATGATAGATGAACAAAAATGGCAGGGGAAAAGTGTCAGTGATGATATTCCTTACTCTTTCACTCGTGTAGAAAGCAACATGCTAGATGATCTATGGCATGAGAGAACTAGGAATGAGGAATCAGTCTCCAGCTCTGTTGTAAATCCAACAGAGACGAGCTCTTCTCCTAAAGGATTATATTTTCCAACTGTTCCACAGGAGTTCGTTTGTCCTTTGACTGGAACTTTATTTAGGGAACCAACTACCCTTGAGACTGGTCAAACCTTTGAACGAGCAGCCATTAAAGCCTGGTTTGAAAAGGGAAAGAAAACTTGCCCTGTGTCTGGAAATAGTTTACATTGTGGTGCCCTGCCATTTACTAACCTTGTTTTGAAGCGTCTGATTGATAATTGGAAGTCAGAACAATTTAGTCACGTCCTGGATTTTGCTTCTCAAATTGTGGGCAAAGAAAGCCATAAACTGAAACATGATGCGGCCTCTGTTTTTAATTTGGAGAGTCTCTTTACTTCATTGGATGGAGTAAACAAAACAAATTATGTCAAGCAACTCATATCTATAGGGCTCCTGTCATTTCTTTTTAGGAGGTTTGAATTAGGAAATGCGGAAGAGAAAACACATGTGTTGGCACTATTGCTACATTGCAGTGAAGCAGATTCTAGTTGCATGCATCAGATCGCAAGAAACATTGATAAAAAATGTCTTCTTGACCTTCTTCAAAGCAAGGATGTTGCCCCAAGAACAAGCACAATTTCATTACTTACTGAATTATTCTCTCTTAAAAGAAATGATGTTATTTCCTTCTTAAATGGCTTTTCTGGTGCGGACATACTGAACACAATGAATGCTCTACTTTTGTATCTTGATTCTTCTCTGCATCAAAAGCCCCTTGTTGCTGTTCTTCTGTTACACCTTGATTTACTGGTATGCTCCCAATAA 2640 0.3917 MASSLEELLAEEGFKGSRRIARTRSSLQSNPVTKPHYSIIDQEKRLSVSDDRIRAERTKSYASQCRIGDNRDTAQSWRPRDNLAERDKLDEGLKNENVEKSSSNTKLSKNHDSKTSARIPRKEIIEVGEQKDNRVKDIYSNELLIANRGKEKDFIDFRYREKWHGTLVKDAKLDKRHGSSSSTLMVGQLSGNTRKNIKQQDRSRSRSISGSFENSYNKKHGLATQTPADLALDEVAVQAVVSILNGYIKRFLKDEDFRTTIHHNCFSSLNFIELEDENGTETKVIRSLEQAIDTIEEAAKESVSQKELKRTSLQLSIITGLSLNDLKYGITCGIPNYKLSACAHLYLSVVYKIQRKDKISAKHLLQVFCDSPSQARTTLLPELWEYLFSPHLSHLKAWYNREVHILVDMPSKTRKIKHLEKVYNEHLDSGTYSFAVYYKDWLTEGAEAPSVPSVTIPSISALESRLGSSLGHSSELASSVDSFSPQPMVSKKLYDSVFGSSSKAGVEEEEEHTMEDNLESCMRHSHGSSIAEQKLTFVSEVVKYTDEDTEEDFNKMTLAIERHTKGTSMIDEQKWQGKSVSDDIPYSFTRVESNMLDDLWHERTRNEESVSSSVVNPTETSSSPKGLYFPTVPQEFVCPLTGTLFREPTTLETGQTFERAAIKAWFEKGKKTCPVSGNSLHCGALPFTNLVLKRLIDNWKSEQFSHVLDFASQIVGKESHKLKHDAASVFNLESLFTSLDGVNKTNYVKQLISIGLLSFLFRRFELGNAEEKTHVLALLLHCSEADSSCMHQIARNIDKKCLLDLLQSKDVAPRTSTISLLTELFSLKRNDVISFLNGFSGADILNTMNALLLYLDSSLHQKPLVAVLLLHLDLLVCSQ 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0434 879 MobiDBLite consensus disorder prediction 178 219 - -
Prci9g0434 879 SMART Ubox_2 635 699 IPR003613 GO:0004842|GO:0016567
Prci9g0434 879 MobiDBLite consensus disorder prediction 21 35 - -
Prci9g0434 879 SUPERFAMILY RING/U-box 621 702 - -
Prci9g0434 879 ProSiteProfiles U-box domain profile. 631 706 IPR003613 GO:0004842|GO:0016567
Prci9g0434 879 CDD RING-Ubox_PUB 633 680 IPR045210 -
Prci9g0434 879 Pfam U-box domain 632 703 IPR003613 GO:0004842|GO:0016567
Prci9g0434 879 MobiDBLite consensus disorder prediction 65 117 - -
Prci9g0434 879 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 706 IPR013083 -
Prci9g0434 879 Coils Coil 285 305 - -
Prci9g0434 879 MobiDBLite consensus disorder prediction 73 97 - -
Prci9g0434 879 PANTHER OS04G0584500 PROTEIN 1 593 - -
Prci9g0434 879 MobiDBLite consensus disorder prediction 16 35 - -
Prci9g0434 879 MobiDBLite consensus disorder prediction 203 219 - -
Prci9g0434 879 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0434 Prci-Chr9 16901260 16907385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0434 582 699 U-box Gene Family AT3G54850 33.613 2.29e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0434 - - pcin:129319608 1674.83