Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0348 ATGATGATGATGAGATTTCATCAGTTTCTTCGTTCACAGTTATGCCTGTTAGTTTCAGTTTATTGTATTCTTGCTTGCTTGGGAGACAATGACGTAGCTGCACAATTGAACGATGATGTTCTTGGTCTGCTAGTGTTTAAATCTGACCTTCATGACCCTTCTGGTCATCTTGCTTCATGGACTGAAGATGATGCGAGTCCTTGCTCGTGGCGGTTCGTGCAGTGTAATCCGGCGACCGGAAGAGTTTCTGAGGTCTCACTTGATGGGTTAGACTTATCTGGGAAAATAGGAAGAGGTCTTGAGAAGTTGCAGTATCTCAAGGTATTATCACTGTCTCATAACAACATAACTGGAAGTATAAGTCCTACACTTGCTCTTTCAAGCAGTCTTCAAAGCCTAAATCTCAGTCACAACAGTTTGTCTGGTTCTATTCCTAGTTCTTTTGTGAATATGGCTTCAATGAAGTCTCTTGATCTCTCAGAGAATTCATTCTCTGGACAAGTGCCAGAAAGCTTGTTTCAAAACCTGCTTTTCCTTCATCATCTTTCTCTTGCTCGGAACGTGTTTGAAGGATCAATTCCCAGTACAATCTCTAGATGTTCCTTATTGAACAGCCTTGATCTTTCCAAAAATCGGTTCAGTGGTGGTGTAGACTTCAATGGGATTTGGTCTTTGACAAGGCTTAGGACTTTGGATCTGTCAAGCAATGCCTTATCTGGAAATTTGCCTCCTGGAATATCAGCCATACACAACTTGAAAGAGATGTTACTACAAGGTAATCACTTTTCAGGACCATTACCCTCTGATATTGGACTGTGCTTGCATTTGAATAGGTTGGATTTTAGTGATAATATGTTCAATGAAGCACTTCCAGAGTCGCTTGGGAGACTTAATTTTCTGACCCTTTTGAAGGCATCAAATAATTTGTTAACCAATGAAATTCCTCAGTGGATTGGTAACATGGCAAGTCTAGAATACCTCGATCTCTCAGACAATCAGTTCTACGGAACCATTCCAGATTCAATCGGTGATTTGAGATCGCTGATTTATCTCAGTCTCTCGAATAACAAGCTTGTGGGAAACATTCCGTCATCATTGGTTTCTTGTACTAAGTTGTCATTTATTCATCTCAGAGGCAATGGTTTCAATGGTAGCATACCAGACGGACTGTTTGGCCTAGAATCATTGGAGGAAATAGACCTATCTCATAATGGGCTAAAGGGTGAAATCCCTGCAGAAATGATTCATGCTTCTAAACTAAAATATTTGAATCTATCTTGGAATGATTTTCACTCTCAAATGCCCCCAGAGTTGGGTATGCTTCAGAATCTGACAGTTTTAGATCTTCAGAGCAATTCACTATATGGCTCTATTCCAGAGGGTGTATGCGATTCAGGCAGTCTGGCCATCCTTCAACTAGATGGAAACTCATTGAATGGTGCTATCCCAGATGAGATTGGAAATTGCACGTCTCTTTTCTTGCTGAGTTTGTGTCACAATAACTTGAGTGGTTCAATTCCAAAGTCCATGTCAAAGCTTACAGAGCTGAAGGTTCTGAAATTGGAATTCAATGACCTGAGTGGAGAGATACCTCAGGAGCTTGGAATGCTACAGAATCTTCTTGCTGTGAATATATCATACAACAGACTCACAGGCAGGCTTCCCAGTGGTAGCATATTTCAAAACTTAGACGAAAGTTCCTTGGAAGGAAACTTAGGTCTTTGTTCACCCTTATTGAAAGGGCCATGTAAAATGGATGTGCCAAAGCCACTGGTTCTTGACCCAAATGCCTATAACAACCAAATGGGTAGGCCAAGAAATGAATCATCCACGAGTACGCCAAGCATCATCCATCGCCACCGATTCTTGAGTGTTTCTGTTCTTGTTGCAATTTCTGCAGCTTTTGTGATCATATTGGGTGTCATTGCTATTAGCCTTTTGAATGTTTCTGTAAGGAGGAGGCTGCAATTTGTTGATAATGCTTTAGAAAGCATGTGTTCAACCTCTTCAAGATCAGGTAGTCCACCCACAGGAAAGCTCATTCTATTCGATCCGGGCCGGTCATCACTTGATTCTATCAGCAACCCGGAAAACTTGCTGAACAAGGCATCTGAGATAGGAGATGGAGTGTTTGGAACAGTTTACAAGGTTCCTTTGGGATCACAAGGTAGAACGGTGGCAATCAAGAGGCTTGTGACTTCAAACATAGTCCAATACCCTGAAGACTTTGATAGGGAAGTGAGAATCTTAGGAAAAGCAAGACACCCTAATCTAATAGCACTGAAAGGATACTATTGGACTCCTCAATTGCAACTTTTGGTCACAGAATATGCATCAAATGGAAGCTTGCAAGCCAAGCTACATGACAGGCTTCCTTCATCTCAACCTCTTTCATGGGTTAATAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGCTTGCTCATTTGCACCATTCATTCCGCCCACCAATCATTCACTACAACCTGAAGCCAGGCAACATTCTACTAGACGAGAACTGCAGCCCGAAGATCTCAGATTTCGTGGCCCGGCTCCTAACAAAGCTTGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCTTTAGGATATGTAGCACCAGAATTGGCCTGCCAGAGCTTGAGGGTGAATGAGAAGTGTGATATCTATGGCTTCGGTGTGATGATTCTCGAGATTGTGACCGGAAGGAGACCGGTGGAATACGGAGAAGACAATGTTGTGATATTGAAAGACCATGTCAGGGTGATGCTTGAGCAAGGAAATGTTCTAGAATGTGTGGATCCAAGCATGAGTGAGTACCCTGAAGATGAGGTCTTGCCAGTTCTGAAGCTAGCTTTGGTATGCACTTCACAGATACCTTCAAGCAGACCTTCCATGGCAGAAGTAGTTCAAATTCTGCAGGTTATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2961 0.4222 MMMMRFHQFLRSQLCLLVSVYCILACLGDNDVAAQLNDDVLGLLVFKSDLHDPSGHLASWTEDDASPCSWRFVQCNPATGRVSEVSLDGLDLSGKIGRGLEKLQYLKVLSLSHNNITGSISPTLALSSSLQSLNLSHNSLSGSIPSSFVNMASMKSLDLSENSFSGQVPESLFQNLLFLHHLSLARNVFEGSIPSTISRCSLLNSLDLSKNRFSGGVDFNGIWSLTRLRTLDLSSNALSGNLPPGISAIHNLKEMLLQGNHFSGPLPSDIGLCLHLNRLDFSDNMFNEALPESLGRLNFLTLLKASNNLLTNEIPQWIGNMASLEYLDLSDNQFYGTIPDSIGDLRSLIYLSLSNNKLVGNIPSSLVSCTKLSFIHLRGNGFNGSIPDGLFGLESLEEIDLSHNGLKGEIPAEMIHASKLKYLNLSWNDFHSQMPPELGMLQNLTVLDLQSNSLYGSIPEGVCDSGSLAILQLDGNSLNGAIPDEIGNCTSLFLLSLCHNNLSGSIPKSMSKLTELKVLKLEFNDLSGEIPQELGMLQNLLAVNISYNRLTGRLPSGSIFQNLDESSLEGNLGLCSPLLKGPCKMDVPKPLVLDPNAYNNQMGRPRNESSTSTPSIIHRHRFLSVSVLVAISAAFVIILGVIAISLLNVSVRRRLQFVDNALESMCSTSSRSGSPPTGKLILFDPGRSSLDSISNPENLLNKASEIGDGVFGTVYKVPLGSQGRTVAIKRLVTSNIVQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEYASNGSLQAKLHDRLPSSQPLSWVNRFKILLGTAKGLAHLHHSFRPPIIHYNLKPGNILLDENCSPKISDFGXARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILEIVTGRRPVEYGEDNVVILKDHVRVMLEQGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0348 987 Pfam Protein kinase domain 702 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0348 987 SMART LRR_typ_2 128 150 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 151 175 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 345 369 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 393 417 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 441 465 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 321 344 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 513 537 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 176 200 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 225 249 IPR003591 -
Prci9g0348 987 SMART LRR_typ_2 103 127 IPR003591 -
Prci9g0348 987 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Prci9g0348 987 Gene3D Transferase(Phosphotransferase) domain 1 782 984 - -
Prci9g0348 987 Pfam Leucine Rich repeat 417 430 IPR001611 GO:0005515
Prci9g0348 987 CDD STKc_IRAK 706 974 - -
Prci9g0348 987 Gene3D Ribonuclease Inhibitor 297 586 IPR032675 -
Prci9g0348 987 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 331 974 - -
Prci9g0348 987 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 778 982 - -
Prci9g0348 987 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 694 777 - -
Prci9g0348 987 SMART LRR_sd22_2 225 254 - -
Prci9g0348 987 SMART LRR_sd22_2 441 464 - -
Prci9g0348 987 SMART LRR_sd22_2 321 353 - -
Prci9g0348 987 SMART LRR_sd22_2 393 425 - -
Prci9g0348 987 SMART LRR_sd22_2 103 135 - -
Prci9g0348 987 SUPERFAMILY RNI-like 205 555 - -
Prci9g0348 987 PRINTS Leucine-rich repeat signature 225 238 - -
Prci9g0348 987 PRINTS Leucine-rich repeat signature 130 143 - -
Prci9g0348 987 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Prci9g0348 987 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Prci9g0348 987 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Prci9g0348 987 ProSiteProfiles Protein kinase domain profile. 700 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0348 987 SUPERFAMILY L domain-like 36 216 - -
Prci9g0348 987 Gene3D Phosphorylase Kinase; domain 1 700 781 - -
Prci9g0348 987 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Prci9g0348 987 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Prci9g0348 987 Pfam Leucine rich repeat 323 381 IPR001611 GO:0005515
Prci9g0348 987 SUPERFAMILY Protein kinase-like (PK-like) 698 982 IPR011009 -
Prci9g0348 987 FunFam LRR receptor-like serine/threonine-protein kinase 319 393 - -
Prci9g0348 987 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 36 196 - -
Prci9g0348 987 FunFam Inactive leucine-rich repeat receptor-like protein kinase 394 586 - -
Prci9g0348 987 Gene3D Ribonuclease Inhibitor 37 193 IPR032675 -
Prci9g0348 987 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 197 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0348 Prci-Chr9 15218069 15221681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0348 28 984 Receptor kinase-like Gene Family AT3G28040 62.828 0.0 1187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci9g0348 Pkinase 6.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0348 - - gmx:100795810 1504.96