Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0342 ATGGCGAACACTGTCTTGGAAGAATCTTCCTCAACCTCTGGTGCTTCTAATTCAACTCTAACTTGGAAATATGACGTTTTTCTGAGTTTTAGAGGAGAAGATTCTCGCTTGAAGTTTACTGATCACTTGTATCATGCTCTTACTAGAAGTGGGATCAGAACTTTTAGAGATGATGAAGGACTTGAGAGAGGAGAAGTTATATCAGCACAGCTCATTCAAGCAATTAAGGATTCTCGCTGCGCAGTTGTGGTTCTCTCTCAAAATTATGCAGATTCCAAATGGTGTTTGGACGAACTACAACAAATTCTTGCAAGCATGAACGAAATGGGTCGACGAGTTTTTCCAATCTTCTATGATGTAGATCCATCTGATGTAAGAAATCAAAGAAAAAGATTCGGAGAAGCTCTGGCCAATCATGAAAAAAGACACAGAGGAAACATGGACACAGTGCAGATTTGGAAAAACTCTTTATCTGAAATTGGAAACATATCTGGTTGGGACACCAGAAGTCGGCCCGAAGCGCACCTTATCGATGAAGTAGTGGGAGCAATATGGAAATATTTATGCTCCCAATTACCATCTTATGATGATAATCTGGTTGGCACAAAGCGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGGTTGGATGACATTTACTTTGTTGGGATATGGGGTATGGGTGGTGTCGGCAAAACAACTCTTGCAAGAGTTGTTTATGAACAAATCTCTGACAGATTTGAAATGTATTGCTTTCTTGCCAATGTTAGAGAAACTTTGCAAACAAAAGGCCTAGTCTCTTTGCAGAAAAGACTTCTTTCTTATCTTGGCATAAACAAGAAAATTCATGATGATTATGAAGGAATGAAGATGATAAGAAAGCTTTTTTGCAATAAAAAGGTTCTTCTTGTCCTTGATGATTTAGATGATACTAGTCAATTAGAGAAGTTGGTTGAAAGTTCAAATTGGTTTGGTAAAGGAAGCAGAATAATTATCACAACAAGAAATAAGCATGTGCTCACTTCATGTGGAGGGAAAATATATGAGATGAAAGCCATGGAGAAAGTTGAGTCTCTTCAACTTTTTTCTAAGAAAGCATTTAACAAAGATCATCCTGAAGAAGGTTATTGGAAGTTATCTAAATCTGTGGTTGCATATGCAGCAGGTCTTCCTTTAGCACTTAAAGTTCTAGGTTCTTTTCTTTGCGGAAGAAGTAAAGATGAATGGATCGATACTTTGGATAGGTTGAAGAAAATTCTAGATATTAATATTCTTAAAATACTTAAAATAAGTTATGATGGATTAAATGAGATAGAAAAGACAATATTTTTAGATATTGCTTGTTTTTTTAGGGGTTGGAGAAAAGATGAAGTGGCCCAAGTTTTGAAAGGTTGTGATCTAAACCCAACAATTGGAATAGAAGTCTTGTTTGAAAAAACTTTACCAGTTGAAACGGAAGATTTTTTGGGATATTCTACTTTAGAGATACATGATTTACTTGAAGAGTTGGGTAAGGACATTATTCGTGAAGAATCTCCCAACGTTGGCAACCGTAGCAGGTTGTGGAAGTTAGAGGACATTAAAGAAGTATTGGAAAATAACATGGGATCAGAAGCAACACAAGTTATTGTTATGCGAGGATTTTATGGGAACTTACATAAAAGAAAAGTACACCCTGAGGCCTTTTCAAAGATGAATAATATTAGATTGCTCATAATGAATGCAGCCGATTGTGAACTCATCTTACCAAGGGAATTGAAACTTTCTAGTGCATTGAAAGTTGTTCATTGGCCGCAATTTCCTCTTGAAACTCTCCCACTTCCCTTGGATAAACTTGTTCATATTAAAATGCAGCAAAGCAAAATAAAACACCTTTGGAATGGTAGACAGCCTATGGAAAAGTTGAAATGTATTGATCTAAGCAATTCTTTCAATTTGATTGAAACTCCGGACTTCTCAAGAGTTCCAAATTTAGAACATTTAAATCTTTATTCCTGTCAATCCCTTGTCATGGTTCATCGCTCACTTGGAGAGTTGAAAAGGCTAGTTGAGGTGAACTTGAGTGAGTGTAGCAATCTTGAAATCCTACCAAGAAAATGGGAAACAAATTCTTTAGAAAAGTTAGATCTAAGTAGGTGTGGAAAAGTTGCAATGTTCCCAGAGTTTGGGGAAGGCATGAAGAAACTATCATATCTTGATGTGAGTGGTACTGCTATAACTACATTTCCAGAGTCACTTGATTCATTGACAGGTCTTGGATATTTGAAATTGAGTGGCTGCTACAAGTCAGTGAAGACTAGTCCTGTGAATCACCAAATTTTTTGCTTGAATCTTACGTTGTTAACAGAGTTATATTTACTATGTTGTGGCTTAAATGAGGGATCAATTCCTGATAATATTAGTGGTTTATCATCACTCATTGTATTGGATCTAAGAGGAAATGATTTTGTTAATCTGCCCACGGGTTGTTTCTCTGGTCTCTTTCGACTTCTCTATCTTTTTTTGGATGATTGCAAAAGGCTCAAGTCATTGCCAAGGCTTCCACTACAGTTGATTCGGTTAAGTGCAGTTGGTTGTGATTCAATGGAACCTTTATCAGGTCGACAGCAATGGAATTTGGTTGCTTCACATGACCATGAGTATCGTCGGCAAATTGAATATGTAAATTCTGATCATGAGAGGCATGATAGTTATTTTGTTCCACCGTTGATGTTCAAGCATGTTAAGTCAGAATGTCTGCCCCAAAGAGATTTTGTTGCAACTATACCAGCTGGATGCAAATTACCATCATGTTGTACAAGTAAAGAATATCATCTTTTGGATGAGTACAGACGAGAATGTGAGATAAAAGTGGACATACCTCTATATCTCCGTGAAAGTGAATGGTTTGGAATTGTAGTATGCCTCCATGTCTCAGGTGAGAGTGGTGTGATTTGGTGGGGTAGTAAGGCTGCTGCAGGAGATGATTATATATGCAAAGAGTGGGCACATGATATTGATATTTGGGAATCTTATAAGACTCCTTCTCATCTGTGCATATTAATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTGACACCTCATAACAATTCCCTTCACATTTTACTTTCTACTTTCCAAAGTTCTAACATTGAAATATTGGGATGTGGGTGGAGAGTGATATGTAAAGAAGAGATGCAAGTGAATCTCATCCGACCACCACTACTTCCTACTCCTCATCAGGTCAAGCTTTCACCAACACTTCATCAAGTAGTTGCAAAAGTTTGGGGAGAAGAGAGAAAAGAGGTACCCAATCTGCACAAGTGGTGA 3321 0.3731 MANTVLEESSSTSGASNSTLTWKYDVFLSFRGEDSRLKFTDHLYHALTRSGIRTFRDDEGLERGEVISAQLIQAIKDSRCAVVVLSQNYADSKWCLDELQQILASMNEMGRRVFPIFYDVDPSDVRNQRKRFGEALANHEKRHRGNMDTVQIWKNSLSEIGNISGWDTRSRPEAHLIDEVVGAIWKYLCSQLPSYDDNLVGTKRRMVDLMSCLEIGLDDIYFVGIWGMGGVGKTTLARVVYEQISDRFEMYCFLANVRETLQTKGLVSLQKRLLSYLGINKKIHDDYEGMKMIRKLFCNKKVLLVLDDLDDTSQLEKLVESSNWFGKGSRIIITTRNKHVLTSCGGKIYEMKAMEKVESLQLFSKKAFNKDHPEEGYWKLSKSVVAYAAGLPLALKVLGSFLCGRSKDEWIDTLDRLKKILDINILKILKISYDGLNEIEKTIFLDIACFFRGWRKDEVAQVLKGCDLNPTIGIEVLFEKTLPVETEDFLGYSTLEIHDLLEELGKDIIREESPNVGNRSRLWKLEDIKEVLENNMGSEATQVIVMRGFYGNLHKRKVHPEAFSKMNNIRLLIMNAADCELILPRELKLSSALKVVHWPQFPLETLPLPLDKLVHIKMQQSKIKHLWNGRQPMEKLKCIDLSNSFNLIETPDFSRVPNLEHLNLYSCQSLVMVHRSLGELKRLVEVNLSECSNLEILPRKWETNSLEKLDLSRCGKVAMFPEFGEGMKKLSYLDVSGTAITTFPESLDSLTGLGYLKLSGCYKSVKTSPVNHQIFCLNLTLLTELYLLCCGLNEGSIPDNISGLSSLIVLDLRGNDFVNLPTGCFSGLFRLLYLFLDDCKRLKSLPRLPLQLIRLSAVGCDSMEPLSGRQQWNLVASHDHEYRRQIEYVNSDHERHDSYFVPPLMFKHVKSECLPQRDFVATIPAGCKLPSCCTSKEYHLLDEYRRECEIKVDIPLYLRESEWFGIVVCLHVSGESGVIWWGSKAAAGDDYICKEWAHDIDIWESYKTPSHLCILMVLELNEKTCWQHLTPHNNSLHILLSTFQSSNIEILGCGWRVICKEEMQVNLIRPPLLPTPHQVKLSPTLHQVVAKVWGEERKEVPNLHKW 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0342 1106 ProSiteProfiles TIR domain profile. 22 192 IPR000157 GO:0007165
Prci9g0342 1106 SMART till_3 23 163 IPR000157 GO:0007165
Prci9g0342 1106 Pfam NB-ARC domain 220 432 IPR002182 GO:0043531
Prci9g0342 1106 Gene3D - 189 353 IPR027417 -
Prci9g0342 1106 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 166 IPR035897 -
Prci9g0342 1106 Gene3D - 18 188 IPR035897 -
Prci9g0342 1106 Gene3D - 354 437 IPR042197 -
Prci9g0342 1106 Pfam TIR domain 23 194 IPR000157 GO:0007165
Prci9g0342 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 447 IPR027417 -
Prci9g0342 1106 Gene3D Ribonuclease Inhibitor 549 720 IPR032675 -
Prci9g0342 1106 Gene3D Ribonuclease Inhibitor 721 874 IPR032675 -
Prci9g0342 1106 Pfam Leucine rich repeat 705 761 IPR001611 GO:0005515
Prci9g0342 1106 SUPERFAMILY "Winged helix" DNA-binding domain 425 533 IPR036390 -
Prci9g0342 1106 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Prci9g0342 1106 SUPERFAMILY L domain-like 557 863 - -
Prci9g0342 1106 FunFam Disease resistance protein (TIR-NBS-LRR class) 355 437 - -
Prci9g0342 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 848 IPR044974 GO:0006952
Prci9g0342 1106 PRINTS Disease resistance protein signature 296 310 - -
Prci9g0342 1106 PRINTS Disease resistance protein signature 388 402 - -
Prci9g0342 1106 PRINTS Disease resistance protein signature 678 694 - -
Prci9g0342 1106 PRINTS Disease resistance protein signature 222 237 - -
Prci9g0342 1106 SMART LRR_typ_2 727 750 IPR003591 -
Prci9g0342 1106 SMART LRR_typ_2 804 827 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0342 Prci-Chr9 15099759 15105591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0342 24 841 WRKY Transcription Factor Family AT4G12020 31.071 2.25e-89 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0342 - - pcin:129303275 1524.22