Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0334 ATGAGTTTGCATCGCTGTGTAGAAGTGCATTTTCTCAAATTAAACTCCACTCATTGTTATAATCTGAGGAATTGGTCCAGATCCTTTCTTTCTCTGTTCTCCACTGTTGTTTCTTCCCCAACTGAAGCCTCAGCCGAACACATTTCCATCATTGATTACCTCAACACCAACGTCAGACTCTCCAAAGCTCAATCCGTCTACATCTCGAAACGACTTTTTCAGGCTAGGTGCCCTCAGCATCCATGGACAGTGCTTCATTATTTTAAACAGATTGGCCTTTCTGAATCGCAGATTCAGTCTATGATTGGTCTTCAACCCCCAATATTGTTCTCCCGTGTCGATGAGAACCTGAAACCGAAAATTGAGTATCTTCAGCTTCTAGGGTTTCAGTGTTCTGAGTTGGGTAAGCTTCTATCAAAGAATGCAACTCTTTTGACGCGTAGTTTGAATAAAACGTTGGTGCCATCTGTGGAAGCTTTCAGGAAAATTGTTAATAAAGAGAAAGATTTGATTAAGTTGCTTCACAGAAATGGGAATTGGATAATCCCGAACCACCAAAAGGTTTTGCGCAATGCTGCTTTCTTACAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCCTTTTTACTTACAACTCAAGGTCGCCTTTTTGTTCAACAAGAGTCTCTGCTTCAAAACTATGTTTCACGGGCTGTCAACATGGGTTTCTCCATAAACTCAAGAATGTTGGTATATGCGCTTCGGGTAATTTATAGTTTGAGCATTGTTAAGTTTGACAGGAAGTTGGAGTTAATTCAGAGTTGCGGGTTTTCCAAAGATGAGACCATGCGAATCTTCAGAAGAGCTCCCGCATTGCTTCACCAATCTGAGAAGAGGCTAAAATTTGGAATTGATGTGTACTTGGATAAAATTATGGTGCCTAGGTCACTACTGGTTAAGAACCCTGTGATTTTGATGTTGAGCATGGAGAAAAGGGTGATTCCTCGATGGAGGGTACTCCAACTGCTAATCTCAAAAAAATTACTACCTGGTATGATTCCGAATTTTCTTGCAGTGCTTAAATTTCGGGAGGATAAATTCGTGGAGAAGTACATTTCGGAGTTTAGAGATAATGAAAAGGCTTTATTGGAGGCATACAAGGGTCATTGTCACGAAGATGCTTCTACATAA 1167 0.4087 MSLHRCVEVHFLKLNSTHCYNLRNWSRSFLSLFSTVVSSPTEASAEHISIIDYLNTNVRLSKAQSVYISKRLFQARCPQHPWTVLHYFKQIGLSESQIQSMIGLQPPILFSRVDENLKPKIEYLQLLGFQCSELGKLLSKNATLLTRSLNKTLVPSVEAFRKIVNKEKDLIKLLHRNGNWIIPNHQKVLRNAAFLQSCGIVGSQLSFLLTTQGRLFVQQESLLQNYVSRAVNMGFSINSRMLVYALRVIYSLSIVKFDRKLELIQSCGFSKDETMRIFRRAPALLHQSEKRLKFGIDVYLDKIMVPRSLLVKNPVILMLSMEKRVIPRWRVLQLLISKKLLPGMIPNFLAVLKFREDKFVEKYISEFRDNEKALLEAYKGHCHEDAST 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0334 388 FunFam Mitochondrial transcription termination factor-like 149 370 - -
Prci9g0334 388 Gene3D Transcription termination factor 3, mitochondrial 160 372 IPR038538 -
Prci9g0334 388 Pfam mTERF 257 359 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 Pfam mTERF 85 296 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 PANTHER CGI-12 PROTEIN-RELATED 49 366 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 240 270 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Prci9g0334 388 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0334 Prci-Chr9 15035212 15037579 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0334 mTERF 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0334 K15031 - qsu:111994264 299.286