Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0333 ATGAGTTTGCATCGCTGTGTAGCAATGCAGTTTCTCAAATCAAACCCCACTCTTTTGAATTCTGTGACCGAACACATTCCCATCATTGATTACTTAAACACCAACATCAAACTCTCCAAAGCGCAATCCGTCTACATCTCAAAACGACTTTCTCAGGCTAGGTGCCCTCAGCATCCATGGACTGTGCTTAATTATTTGAAACAGACTGGACTTTCTGAATCGCAGATTCTGTCTATGATTGGTTGTCAACCCCAAATATTATTCTCCAGTATCAGTGAAACCCTGAAGCCGAAAATCGAGTACTTTCAGCTTCTAGGGTTCCAGGGTTCTGAGTTGAGTAAGCTTCTATCAAAAAATGCAAAGCTTTTGGTGTGTAGCTTGAATAAAACGTTGGTGCCCTCTGTGGAGGCTTTCAGGAGAATCATTAACGAAGAGAAAGATTTGATTAAGTTGCTGCACAGAAATGGGAATTGGATGATCCCGAACCACCAAAAGGTTTTGCGTAATGCTGCTTTCTTACAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCCTTTTTACTTGCAACTGAAGGTCGCCTTTTTGTTCAACAAGAATCTCTGCTTCAAAACCATGTTTCACGGGCTGTCAACATGGGTTTCTCCATAAACTCAAGAATGTTTGTGTATGCGCTTCGGGTAATTTCTAGTTTGAGCATTGTTAAGCTTGACAGAAAGTTGGAGTTAATTCAGAGTTGCGGGTTTTCCAAAGATGAGACCATGCGAATCTTTAGAAGATCTCCCCCATTGCTTCATCAATCTGAGAAGAGGCTGAAATTTGGAATTGGTGTGTGCTTGGATAAAATTATGGTGCCTAGGTCACTACTGGTTAATAACCCTGTGATTTTGATGTTAAGCATGGAGAAAAGGGTGATTCCTCGATGGAGGGTACTCCAACTGTTAATCTCAAAAAAATTAATACCTGATAAGATTCCGAATTTTCTTGCAGTGCTTAAGTTACGGGAGGATAAATTCATGGAGAAGTACATTTCGGAGTTTAGAGATAATGAAAAGGCTTTATTGGAGGCATACAAGGGTCACTGTCACGAAGATGCTTCTACATAA 1101 0.4087 MSLHRCVAMQFLKSNPTLLNSVTEHIPIIDYLNTNIKLSKAQSVYISKRLSQARCPQHPWTVLNYLKQTGLSESQILSMIGCQPQILFSSISETLKPKIEYFQLLGFQGSELSKLLSKNAKLLVCSLNKTLVPSVEAFRRIINEEKDLIKLLHRNGNWMIPNHQKVLRNAAFLQSCGIVGSQLSFLLATEGRLFVQQESLLQNHVSRAVNMGFSINSRMFVYALRVISSLSIVKLDRKLELIQSCGFSKDETMRIFRRSPPLLHQSEKRLKFGIGVCLDKIMVPRSLLVNNPVILMLSMEKRVIPRWRVLQLLISKKLIPDKIPNFLAVLKLREDKFMEKYISEFRDNEKALLEAYKGHCHEDAST 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0333 366 Pfam mTERF 63 271 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 Pfam mTERF 233 337 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 285 317 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 77 108 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 149 179 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 218 248 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 SMART mt_12 113 145 IPR003690 GO:0003690|GO:0006355
Prci9g0333 366 FunFam Mitochondrial transcription termination factor-like 127 348 - -
Prci9g0333 366 Gene3D Transcription termination factor 3, mitochondrial 140 350 IPR038538 -
Prci9g0333 366 PANTHER CGI-12 PROTEIN-RELATED 28 344 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0333 Prci-Chr9 15031958 15033119 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0333 mTERF 5.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0333 K15031 - qsa:O6P43_021347 287.345