Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0330 ATGAGTTTGCGTCGCTGTGTAGCAATGCAGTTTCTCAAATCAAACCCCACTCTTTTGAATTCTGTGAGTAATTTGTCCAGAACCTTTCTTTCTTTGTTCTCTATCGTTTCTATCCCAACTCATTTCTCAGCCGAACACATTCCCATCATTGATTACCTCAACACCAACGTCAAACTCTCCAAAGCTCAATCCGTCTACATCTCAAAACGACTTTCTCAGGCTAGGTGCCCTCAGCATCCATGGACTGTGCTTAATTATTTGAAGCAGACTGGTCTTTCTGAATCGCAGATTCTATCTATGATTGCTTCTAGGGTTCCAGGGTTCCAGGGTTCTGAGTTGGGTAAGCTTCTGTCAAAGAATGCAAATCTTTTGGTGTATAGTTTGAATAAAACTTTGGTGCCCTCTGTGGAGGCTTTCAGGAAAATCGTTAATAAAGAGAAAGATTTGATGAAGTTGCTTCATAGAAATGGGAATTGGATAATCCCAAAGTACCAAAAGGTTTTGCGCAATGCTGCTTTCTTCCAGGGTTGTGGGATCGTTGGGTCTCAGCTTTCTGTTTTACTTACATGTCATGGTCGCCTTTTTCTTCAACAAGAGTCTCTGCTTCAAAACCATGTTTCACGGGCTGTCAACATGGGTTTCTCCATAAACTCAAGAATGTCGGTATATGCGCTTCGGGTAATTTATAGTTTGAGCATTGATAAGTTTGACAGGAAGTTGGAGTTAATTCAGAGTTGCGGGTTTTCCAAAGATGAGACCATGCGAATCTTCAGAAGAGCTCCCGCATTGCTTCACCAATCTGAGAAGAGGCTAAAATTTAGAATTGACATGTACTTGGATAAAGTTATGGTGCCTAGGTCACTACTGGTTAGTAACCCTGTGATTTTGATGTTAAGCGTGGAGAAAAGGGTGATTCCTCGATGGAGGGTGTTCCAACTGCTAATTTCAAAAAAATTACAACTTGATAAGAATCCAAGTTTTCTTGAAGTGCTTGGATTGCGGGAGGATAAATTCTTGGCGAAATACATTTCGGAGTTTAGAGATAATGAAAAGGCTTTATTGGAGGCATACAAGGGTCGCTGTCTCGAAGATGGTTCTACATAA 1104 0.4103 MSLRRCVAMQFLKSNPTLLNSVSNLSRTFLSLFSIVSIPTHFSAEHIPIIDYLNTNVKLSKAQSVYISKRLSQARCPQHPWTVLNYLKQTGLSESQILSMIASRVPGFQGSELGKLLSKNANLLVYSLNKTLVPSVEAFRKIVNKEKDLMKLLHRNGNWIIPKYQKVLRNAAFFQGCGIVGSQLSVLLTCHGRLFLQQESLLQNHVSRAVNMGFSINSRMSVYALRVIYSLSIDKFDRKLELIQSCGFSKDETMRIFRRAPALLHQSEKRLKFRIDMYLDKVMVPRSLLVSNPVILMLSVEKRVIPRWRVFQLLISKKLQLDKNPSFLEVLGLREDKFLAKYISEFRDNEKALLEAYKGRCLEDGST 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0330 367 Pfam mTERF 108 243 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 Pfam mTERF 230 339 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 SMART mt_12 219 249 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 SMART mt_12 150 180 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 SMART mt_12 286 320 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 PANTHER CGI-12 PROTEIN-RELATED 50 345 IPR003690 GO:0003690|GO:0006355
Prci9g0330 367 Gene3D Transcription termination factor 3, mitochondrial 51 351 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0330 Prci-Chr9 15026294 15027635 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0330 mTERF 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0330 K15031 - pcin:129320888 273.478