Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0328 ATGATTGGTGTTCAACCCCAAATATTGTTCTTGCGTGTCGATGAAACCCTGAAGCCGAAAATTGAGTACCTTAAGCTGCTAGGGTTTCAGGGCTCTGAATTGGCTAAGCTTCTGTCCAAGAATCCAATTTTTTTGATGTTGAGTTTGAATAAAACGTTGGTGCCCTCTGTGGGGGCTATTAGGAAAATAGTTAATGTAGAGGAAGATTTGATTAAGTTGCTTCGCAGAGATGGGAGTTGGATAATCAAAGACCACAGAAAGATTTTGCGCAATGCTTCTTTCTTCCAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCACATTTATGCGTACAACATGCTCGCCTTTTTGTCATGCGAGAGTCCGTGCTTCGAAGCTATGTTTCACGGGCTGTAAACATGGGTTTCTGCATACACTCAAGAATGTTGGTACATGCGGTCCTGGCAATTAGTGGCTTAAGCTTTGATACGTTTAACAAAAAGTTGGAGTCAATTCAGAGTTGCGGGTTTTCTAAACAAGAGACCATGCAAATGCTTAGAAAGGCTCCCTCGTTGCTTCATCGATCTGAGAAGAATCTAAAATTTGGAATTCAAGCGTGCTTGGGTAAAATTATGCTGCCTAAGTCACTGCTTGTTAAGAACCCTGTGATTTTGACGTTAAGCTTGGAGAAAAGGGTGATTCCTCGATGGAGGGTTTTGCAACTCCTAATCTCAAAAGAGTTACATAAGAAGAATCCAAGTTTTCTTAAAGTGCTACTATTGCCGGAGGGGAAATTCTTGCAGGAGTATATTTTCAAGTTTAGCTATGATGTAGAGGCATTATTAGCAGCTTACAAGAGTCAGCATAGAGGAAGGAATGGGAGTTTCAATTCTGATGCCATTTTTCTCAGTTAA 891 0.4119 MIGVQPQILFLRVDETLKPKIEYLKLLGFQGSELAKLLSKNPIFLMLSLNKTLVPSVGAIRKIVNVEEDLIKLLRRDGSWIIKDHRKILRNASFFQSCGIVGSQLSHLCVQHARLFVMRESVLRSYVSRAVNMGFCIHSRMLVHAVLAISGLSFDTFNKKLESIQSCGFSKQETMQMLRKAPSLLHRSEKNLKFGIQACLGKIMLPKSLLVKNPVILTLSLEKRVIPRWRVLQLLISKELHKKNPSFLKVLLLPEGKFLQEYIFKFSYDVEALLAAYKSQHRGRNGSFNSDAIFLS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0328 296 FunFam Mitochondrial transcription termination factor-like 49 270 - -
Prci9g0328 296 SMART mt_12 140 170 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 106 136 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 207 241 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 35 67 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 SMART mt_12 71 101 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 PANTHER CGI-12 PROTEIN-RELATED 4 265 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 Gene3D Transcription termination factor 3, mitochondrial 1 267 IPR038538 -
Prci9g0328 296 Pfam mTERF 152 258 IPR003690 GO:0003690|GO:0006355
Prci9g0328 296 Pfam mTERF 4 126 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0328 Prci-Chr9 14935294 14936639 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0328 mTERF 5.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0328 K15031 - aew:130752103 248.44