Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0327 ATGCATTTTCTCAAATTAAACCCCACTCTTTTATATTCTGTGAGTAATTTGCCCAGATCCTTTCTTTCTCTGTTCTCTACTGTTGTTTCTTACCCAACTAAAACCACGGCCGAAGACATTTCCATCATTGATTACCTCAACACCAACGTCAAACTCTCCAAAGCTCAATCCGTCTACATCTCGAAACGACTCTCTAAGGCTAGGTCCCTTCAGCATTCATGGACTGTGCTTAATTATTTTAAACAGGTTGGACTTTCTGAATCGCAGATTCTATCTATGATTGGCGTTCAACCCCAGATTTTGTTTTCAGGTGTCGATAAAACCCTGAAGCCGAAAATTGAGTATCTTCAGTTTCTAGGGTTTCAGGGTTCTGAGTTGGGTGAGCTTCTCTCCAAGAATCCATATCTTTTGATGTGTAGTTTGAATAAAACGTTGGTGCCCTCTGTGGAGGCTATTAGGAAAATTGTTAATAAAGAGGAAGATTTTATTAAGTTGCTTATCAGATATGGGAGTTGGGTAATCCAAGACCACCGAAAGGTTTTGCGCAATGCTGCTTTTTTCCAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCCTTTTTGCTTGTAAATCAAGGTCGCCTTTTTGTTCGACATGAGTCTCTGCTTCAAAACTATGTTTCACGGGCTGTCAACATGGGTTTCTCCATAAACTCAAGAATGTTCGTATATGCACTCCGGTCAATTAGTTGTTTGAGCGTTGTAAAGTTGGACAGAAAGTTGGAGTTAATTCAGAGTTGCGGGTTTTCCAAAGATGAGACCATGCAAATCTTTAGAAGAGCTCCACCGTTGCTTCTCCAATCTGAGCAGAGGCTAAAATTTGGAATTCATGTGTGCATGGATAACATTATGTTGCCCAAGTCACAACTGGTTAATACCCCTGCGATTTTGACCTTGAGCTTGGAGAAAAGAGTGACTCCTCGATGGAGGGTTTTGCAACTCCTAATCTCAAAAGAGCTACTTAAGAAGAATCCAAGTTTTTTAGAGTGTTACTATTGCCGGAGGGGAAATTCTTGCAGGACTATATTTTCAAATTTAGAGATAATGAAGAGGCTTTATTGGAGGCTTACAAGGGTCAGATCTAAAAGATGCTTCTACTTAATAATTATCATCAAGTTCTGTTTAGTAGGCTTCTATTCACAGCCTTAG 1185 0.4017 MHFLKLNPTLLYSVSNLPRSFLSLFSTVVSYPTKTTAEDISIIDYLNTNVKLSKAQSVYISKRLSKARSLQHSWTVLNYFKQVGLSESQILSMIGVQPQILFSGVDKTLKPKIEYLQFLGFQGSELGELLSKNPYLLMCSLNKTLVPSVEAIRKIVNKEEDFIKLLIRYGSWVIQDHRKVLRNAAFFQSCGIVGSQLSFLLVNQGRLFVRHESLLQNYVSRAVNMGFSINSRMFVYALRSISCLSVVKLDRKLELIQSCGFSKDETMQIFRRAPPLLLQSEQRLKFGIHVCMDNIMLPKSQLVNTPAILTLSLEKRVTPRWRVLQLLISKELLKKNPSFLECYYCRRGNSCRTIFSNLEIMKRLYWRLTRVRSKRCFYLIIIIKFCLVGFYSQP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0327 394 Pfam mTERF 77 207 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 Pfam mTERF 246 340 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 FunFam Mitochondrial transcription termination factor-like 141 347 - -
Prci9g0327 394 SMART mt_12 163 193 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 SMART mt_12 299 331 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 PANTHER CGI-12 PROTEIN-RELATED 41 336 IPR003690 GO:0003690|GO:0006355
Prci9g0327 394 Gene3D Transcription termination factor 3, mitochondrial 158 348 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0327 Prci-Chr9 14924374 14927398 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0327 mTERF 5.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0327 K15031 - qsa:O6P43_017275 278.87