Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0326 ATGATTGGTGTTCAACCCCAGGTATTGTTTTCACGTGTCGATAACACCCTGAAGCCGAAAATTGAGTACCTTCAGCTTCTAGGGTTTCGGGGTTCTGAGTTGGGTGAGCTTCTCTCCAGCAATCCAATTCTTTTGACGTGCAGTTTGAATAATACGTTGGTGCCTTCTGTAGAGGCTACTAAGAAAATAGTTAACGAAGAGAAAGATTTGATTAAGTTGCTTCGCAGAAATGCGAATTGGATAATCCCTTACCACAGAAAGATTTTGCGCAATGCTGCTTTCTTCCAGAGTTGTGGGATCGTTGGGTCTCAACTTTCATATTTATGCATACAACATGCTCGCCTTTTTGTCATGCGAGATTCCGTGCTTCGAAACTATGTTTCACGGGCTGTAAACATGGGTTTCTGCATAAACTCAAGAATGCTGGTACGTGCGGTCGTGGTAATTAGTGGCTTAAGCTTTGATACGTTTAACAGAAAGTTGGAGTCAATTCAGAGTTGTGGGTTTTCTAAACAAGAGACCGTACAAATGTTTAGAAAAGCTCCCACTTTGCTTCAGCGATCTGAGAAGAATCTAAAAGTTAAAATTCAAGTATGTTTGGATAAAATTATGCTTCCTAAGTCAATGCTTGTTAAGAACCCTGTGATTTTGACGTTAAGCATGGAGAAACGGGTGATTCCTCGATGGAGGGTTTTGCAACTCCTAATCTCAAGAGTTACTTGA 723 0.4094 MIGVQPQVLFSRVDNTLKPKIEYLQLLGFRGSELGELLSSNPILLTCSLNNTLVPSVEATKKIVNEEKDLIKLLRRNANWIIPYHRKILRNAAFFQSCGIVGSQLSYLCIQHARLFVMRDSVLRNYVSRAVNMGFCINSRMLVRAVVVISGLSFDTFNRKLESIQSCGFSKQETVQMFRKAPTLLQRSEKNLKVKIQVCLDKIMLPKSMLVKNPVILTLSMEKRVIPRWRVLQLLISRVT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0326 240 Gene3D Transcription termination factor 3, mitochondrial 63 240 IPR038538 -
Prci9g0326 240 Pfam mTERF 160 233 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 Pfam mTERF 5 162 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 71 101 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 106 136 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 207 239 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 140 170 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Prci9g0326 240 PANTHER CGI-12 PROTEIN-RELATED 4 235 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0326 Prci-Chr9 14877456 14878178 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0326 mTERF 5.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0326 K15031 - cit:107174720 213.772