Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0325 ATGCGTCGCAAATCCGAGGCCCTTCGCATTGCAATGCAAACTAACATCTCGTTGCCACTCAAGCTTCAAGTCCAATCTCTCTTTGAGGCTAGGTGCCCTCCGCATCCAAGGACAGCGGTAAATTATTTGAAACAGATTGGACTTTCTGAATCGCAGATTCTATCCATGATTGGTGTTCAACCCGAAATATTGTTCTTGCGTGTCGATGAAACCCTGAAGCCGAAAATTGAGTACCTTAAGCTGCTAGGGTTTCAGGGCTCTGAATTGGCTAAGCTTCTGTCCAAGAATCCAATTTTTTTGATGTTGAGTTTGAATAAAACGTTGGTGCCCTCTGTGGAGGCTATTAGGAAAATAGTTAATGTAGAGGAAGATTTGATTAAGTTGCTTCGCAGAGATGGGAGTTGGATAATCAAAGACCACAGAAAGATTTTGCGCAATGCTTCTTTCTTCCAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCACATTTATGCGTACAACATGCTCGCCTTTTTGTCATGCGAGAGTCCGTGCTTCGAAGCTATGTTTCACGGGCTGTAAACATGGGTTTCTGCATACACTCAAGAATGTTGGTACATGCGGTCCTGGCAATTAGTGGCTTAAGCTTTGATACGTTTAACAAAAAGTTGGAGTCAATTCAGAGTTGCGGGTTTTCTAAACAAGAGACCATGCAAATGCTTAGAAAGGCTCCCTCGTTGCTTCATCGATCTGAGAAGAATCTAAAATTTGGAATTCAAGCGTGCTTTGGTAAAATTATGCTGCCTAAGTCACTGCTTGTTAAGAACCCTGTGATTTTGACGTTAAGCTTGGAGAAAAGGGTGATTCCTCGATGGAGGGTTTTGCAACTCCTAATCTCAAAAGAGTTACATAAGAAGAATCCAAGTTTTCTTAAAGTGCTACTATTGCCGGAGGGGAAATTCTTGCAGGAGTATATTTTCAAGTTTAGCTATGATGTAGAGGCATTATTAGCAGCTTACAAGAGTCAGCATAGAGGAAGGAATGGGAGTTTCAATTCTGACGCCATTTTTCTCAGTTAA 1056 0.4205 MRRKSEALRIAMQTNISLPLKLQVQSLFEARCPPHPRTAVNYLKQIGLSESQILSMIGVQPEILFLRVDETLKPKIEYLKLLGFQGSELAKLLSKNPIFLMLSLNKTLVPSVEAIRKIVNVEEDLIKLLRRDGSWIIKDHRKILRNASFFQSCGIVGSQLSHLCVQHARLFVMRESVLRSYVSRAVNMGFCIHSRMLVHAVLAISGLSFDTFNKKLESIQSCGFSKQETMQMLRKAPSLLHRSEKNLKFGIQACFGKIMLPKSLLVKNPVILTLSLEKRVIPRWRVLQLLISKELHKKNPSFLKVLLLPEGKFLQEYIFKFSYDVEALLAAYKSQHRGRNGSFNSDAIFLS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0325 351 SMART mt_12 195 225 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 90 122 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 262 296 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 161 191 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 54 85 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 SMART mt_12 126 156 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 PANTHER CGI-12 PROTEIN-RELATED 23 320 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 Gene3D Transcription termination factor 3, mitochondrial 119 322 IPR038538 -
Prci9g0325 351 FunFam Mitochondrial transcription termination factor-like 104 325 - -
Prci9g0325 351 Pfam mTERF 207 313 IPR003690 GO:0003690|GO:0006355
Prci9g0325 351 Pfam mTERF 36 181 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0325 Prci-Chr9 14804545 14806093 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0325 mTERF 9.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0325 K15031 - aew:130752103 266.159