Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0315 ATGACGACGAAGGAGGATGAGAAGATGGAGGCAAAACTGAAGGGTTTCAAATCTGATGGTCTGGTCATCAACGAGCTTGTGGGAGAGGGACGTGGATTTCAGTTTTGCCCTACAGAACAAGAGCTGATTATGGCCTATTTGAAGAAGAAAGTGATGGATGAGCCGTTAGAACCAAACCCAATCATTGAAGTTGAAATTTACAAGTTCAATCCTCAACAGCTATCCAATAGAAAATATACAAACGGAAAGAGGCCAAAACGATCAACACTAGATGGATACTGGAAGGCAATAAGAAAATGTCAATCAATTCATTCAGAAGATGGAACAACTTTAATTGGTAAATGGAGAACTTTGGTTTATTACGAAGGCACTTATCAGCAAAGTAAGAAGACTCATTGGATCATGTGTGAGTATTTTCTGGATGAGATAACACATGCAAGAACAAGTCCTTTGGATATGAAGTTGGATGATTGGGTTTTGTGTAAGATTTACAAGAACAATAAGAACTACAAGAATAGCTGTACTGAGAAGGAAACATGGTTAGAACCATTAAGAATGGAGTCAATTCAAATGACTTGTTCTTTACAAATATTGCCTCAACCTCCTCAATCACAACTTGAAAGCGACAACATGGATCAATTTCAGTTCAATAATCCTCATTCATCAGAAATCTCTCATGCTTTTCCTGGTCCCGCATCTTTTTATGAAATTATAAATAAAAAGTCAAGTTCAGATGATGTTTGGAAATACATAGATCTTGAGAATTTGGACACAGAAAACAATGATCCTATGGTCTCAAGCATGCTTCCTTCTATGGTGGACACAACTACATCATCAGTAACATTTCACCCAGAAATGGAGTCTTCAAGCTTCATATTCATCTAA 885 0.3718 MTTKEDEKMEAKLKGFKSDGLVINELVGEGRGFQFCPTEQELIMAYLKKKVMDEPLEPNPIIEVEIYKFNPQQLSNRKYTNGKRPKRSTLDGYWKAIRKCQSIHSEDGTTLIGKWRTLVYYEGTYQQSKKTHWIMCEYFLDEITHARTSPLDMKLDDWVLCKIYKNNKNYKNSCTEKETWLEPLRMESIQMTCSLQILPQPPQSQLESDNMDQFQFNNPHSSEISHAFPGPASFYEIINKKSSSDDVWKYIDLENLDTENNDPMVSSMLPSMVDTTTSSVTFHPEMESSSFIFI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0315 294 Gene3D NAC domain 38 171 IPR036093 GO:0003677|GO:0006355
Prci9g0315 294 Pfam No apical meristem (NAM) protein 31 139 IPR003441 GO:0003677|GO:0006355
Prci9g0315 294 ProSiteProfiles NAC domain profile. 29 166 IPR003441 GO:0003677|GO:0006355
Prci9g0315 294 SUPERFAMILY NAC domain 25 166 IPR036093 GO:0003677|GO:0006355
Prci9g0315 294 PANTHER NAC TRANSCRIPTION FACTOR 56 32 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0315 Prci-Chr9 14644699 14648280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0315 32 187 NAC Transcription Factor Family AT1G69490 39.306 1.06e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g0315 NAM 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0315 - - pcin:129319589 590.882