Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0314 ATGCATTTTCTCAAATTAAACCCCACTATTGTGTACTCTATGAGTAATTTGTCCAGATCCTTTCTTTCTCTGGTCTCTACTGTTGTTTCTTCCCCAACTCAAGCCTCGGCCGATTCCATCATTGATTACCTCAACACCAACGTCAAACTCTCCAAAGCTCAATCCGTCTACATATCGAAACGACTTTCTCAGGCTAGGCCCCCTCAGAATTCATGGACTGTGCTTAATTATTTTAAACAGATTGGACTTTCTGAATCGCAGATTCTATCTATGATTGGGGTTCAACCCCAGATTTTGTTTTCAGGTGTCGGTAAAACTCTGAAGCCGAAAATTGAGTACCTTCAGTTTCTAGGGTTTCGGGGTTCTGAGTTGGGTGAGCTTCTCTCCAAGAATCCATATCTTTTGATGTGCAGTTTGAATAAAACGTTGGTGCCTTCTGTAGAGGCTATTAGGAAAATTGTTAATGAAGAGGAAGATTTGATGAAGTTGCTACGCAGAGATGGGAATTGGATAATCCAAGACCACCGAAAGATTTTGCGCAATGCTGCTTTCTTCCAGAGTTGTGGGATCGTTGGGTCTCAGCTTTCATATTTATGCATGCAACAAGCTCGCCTTTTTGTCATGCGAGAGTCCGTGCTTCGAAACTATGTTTCACGGGCTGTAAACATGGGTTTCTGCATAAACTCAAGAATGTTGGTACATGCGGTCATGGTAATTAGTAGCTTAAGCTTTGATACGTTTAACAGGAAGTTGGAGTCAATTCAGAGTTGTGGGTTTTCTAAACAAGAGACCGTGCAAATGTTTAGAAGAGCTCCCACTTTGCTTCAGCGATCTGAGAAGAATCTAAAAGTTAAAATTCAAGTGTGCTTGGATAAAATTATGCTTCCTAAGTCAGTGCTTGTTAAGAACCCTGTGATTTTGACGTTAAGCATGGAGAAACGGGTGATTCCTCGATGGAGGGTTTTGCAACTCCTAATCTCAGAAGAGTTACTTAAGAAGAATCCAAGTTTTCCTCAAGTGCTACTATTGCCGGAGGGGAAATTCTTGCAGAAGTATATTTTCGAGTTTAGAGATAATGAAGAGGCTTTATTGGCGGCTTACAAGAGTTAG 1110 0.4117 MHFLKLNPTIVYSMSNLSRSFLSLVSTVVSSPTQASADSIIDYLNTNVKLSKAQSVYISKRLSQARPPQNSWTVLNYFKQIGLSESQILSMIGVQPQILFSGVGKTLKPKIEYLQFLGFRGSELGELLSKNPYLLMCSLNKTLVPSVEAIRKIVNEEEDLMKLLRRDGNWIIQDHRKILRNAAFFQSCGIVGSQLSYLCMQQARLFVMRESVLRNYVSRAVNMGFCINSRMLVHAVMVISSLSFDTFNRKLESIQSCGFSKQETVQMFRRAPTLLQRSEKNLKVKIQVCLDKIMLPKSVLVKNPVILTLSMEKRVIPRWRVLQLLISEELLKKNPSFPQVLLLPEGKFLQKYIFEFRDNEEALLAAYKS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0314 369 FunFam Mitochondrial transcription termination factor-like 139 359 - -
Prci9g0314 369 PANTHER CGI-12 PROTEIN-RELATED 36 355 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 Pfam mTERF 241 348 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 Pfam mTERF 22 216 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 Coils Coil 147 167 - -
Prci9g0314 369 SMART mt_12 196 226 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 SMART mt_12 161 191 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 SMART mt_12 297 329 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Prci9g0314 369 Gene3D Transcription termination factor 3, mitochondrial 152 357 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0314 Prci-Chr9 14615555 14616664 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci9g0314 mTERF 1.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0314 K15031 - jre:108985778 294.664