Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0295 ATGTCAAAATGGATCAATACAAGATGGCCATTGGAAGTGACAGGAAAATGTCGGTCCATCCATTCTGATGATGGAAGAACATTAATTGGAAAACGTAGAACTTTGATTTATTATAAAGGGAATCATCAAAGGAGCAAGAAGACCAATTGGATCATGCATGAGTATTATTTGGATCTGACAACACATGCAAGAGTGAGTTCCTTAGATACGAAGTTGGGTGATTGGGTTCTATGTAAGATTTACAACAACAACAAGAACTTCATAAAAAGCTATACTAAGGAGGACGCACAGTGGTTAGAACCATATTTAAGAAAAGAATCAACTCAAATGACTCATTCTTCTCAATATCATCCTCAACCTCAATCACAGCTTGAAAGCCACAGTATGGATATGATTCAGTTGGATAATTCTCATTCATTAGAAATCTCTCATGCTTCTCCTAGACCTCCATCTTTTTATGAAATTATAAACAAAATGACTCATTCTTCTCAAACTGATTCTCAAGATCAATCACAGCTTCAAAGAAACAATATGGATCCGATTCAATTCAACAATCCTCATTCATCAGAAATCTCTCAATCTTCTGCTAGTCCTTCATCTTTCAATGAAATCAACAATGGAACGTCAAGTTCAGATGATGTTTGA 645 0.3535 MSKWINTRWPLEVTGKCRSIHSDDGRTLIGKRRTLIYYKGNHQRSKKTNWIMHEYYLDLTTHARVSSLDTKLGDWVLCKIYNNNKNFIKSYTKEDAQWLEPYLRKESTQMTHSSQYHPQPQSQLESHSMDMIQLDNSHSLEISHASPRPPSFYEIINKMTHSSQTDSQDQSQLQRNNMDPIQFNNPHSSEISQSSASPSSFNEINNGTSSSDDV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0295 214 Gene3D NAC domain 6 89 IPR036093 GO:0003677|GO:0006355
Prci9g0295 214 Pfam No apical meristem (NAM) protein 13 57 IPR003441 GO:0003677|GO:0006355
Prci9g0295 214 SUPERFAMILY NAC domain 13 82 IPR036093 GO:0003677|GO:0006355
Prci9g0295 214 ProSiteProfiles NAC domain profile. 1 83 IPR003441 GO:0003677|GO:0006355
Prci9g0295 214 MobiDBLite consensus disorder prediction 161 214 - -
Prci9g0295 214 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0295 Prci-Chr9 14270055 14275317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0295 12 84 NAC Transcription Factor Family AT1G56010 39.726 7.93e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g0295 NAM 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0295 - - pcin:129320041 428.328