Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0252 ATGCTGTACAGTGGATTATCAACGCTTTCAGGAAGCGATTCTCGCTTCTTCAACCTCCCAACACCATTAATTTCAACCACCAAATCTTTCAAATCCTCCTCCGTTCGACTTCCGGCGTCGTCGCGTTCTGTTTCATTGAAAGTTAGGTCTCTGTCCGTTGCTGAGCCCTCTGGATTTAGCTTCTACGAGCTTCTCGGCATCTCCGAATCCGGATCCTTACCCGACATCAAGCAGGCTTACAAGCAACTTGCCCGAAAGTACCATCCGGATGTGTCGCCGCCGGATCGGGTCGACGAGTACACGAAGATGTTCATTAAGCTCCATGAAGCTTATGAGACCTTGTCTGATCCTACAAAGAGAGCTATGTACGATAGAGGCATGGACAGAGGGCTTGCTTACGCTACTTATGGAATCTACTTCGACGAAGAGAGGATTCAACGGAATAAAGAATGGAGAGAACGTTGGGAAGCTCAACTATCAAAGCTGAAGAACAGAACTACTAACAAATATGGCGATAGGAGTCACTCATGGGCTTCTCGAATCCGTCGGGAGAACAAAGAATCCTTAAACTAA 573 0.4712 MLYSGLSTLSGSDSRFFNLPTPLISTTKSFKSSSVRLPASSRSVSLKVRSLSVAEPSGFSFYELLGISESGSLPDIKQAYKQLARKYHPDVSPPDRVDEYTKMFIKLHEAYETLSDPTKRAMYDRGMDRGLAYATYGIYFDEERIQRNKEWRERWEAQLSKLKNRTTNKYGDRSHSWASRIRRENKESLN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0252 190 SMART dnaj_3 59 119 IPR001623 -
Prci9g0252 190 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Prci9g0252 190 CDD DnaJ 61 116 IPR001623 -
Prci9g0252 190 Gene3D DnaJ domain 49 169 IPR036869 -
Prci9g0252 190 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 32 188 - -
Prci9g0252 190 SUPERFAMILY Chaperone J-domain 59 137 IPR036869 -
Prci9g0252 190 PRINTS DnaJ domain signature 99 119 IPR001623 -
Prci9g0252 190 PRINTS DnaJ domain signature 119 138 IPR001623 -
Prci9g0252 190 PRINTS DnaJ domain signature 80 95 IPR001623 -
Prci9g0252 190 PRINTS DnaJ domain signature 62 80 IPR001623 -
Prci9g0252 190 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Prci9g0252 190 Pfam DnaJ domain 61 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0252 Prci-Chr9 12104964 12106609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0252 60 124 C2H2 Transcription Factor Family AT1G74250 42.647 9.11e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0252 - - pcin:129320802 370.548