Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0232 ATGGCTTCTCCCGGTGGGAGTGGTGGTGGCAGCGCTTCTGACAGCCCGAACATTATAGACCAGAAAAAGAGGAAGAGGATGCTATCAAATCGCGAGTCGGCACGCCGATCGAGGATGAAGAAACAGCAACATCAGGATGATCTAGTAAAGCAGGTGGGTGAGTTGAAGAAGGAGAATCATGAGATTATAAGGAATTTGAGCATCACCAATCAACTTTATGTGAACATGGAGGCAGAAAATGCAATCTTGAGGACTCAGATGGCAGAGTTGACCAATAGGTTGGAGTCTTTGAATGAGATCATAAGCTACATAAACAACAACTCAAGCAATAATTATCTCTTTGATGATGGGATCACTAATGACGCAGCGATGATCAATGATTGTGGCTTCTTCAACCCTAACTGGATAAATCAACCTGCTATCGTGGCTTCTGGCAATTATATGATGTATTGA 453 0.4327 MASPGGSGGGSASDSPNIIDQKKRKRMLSNRESARRSRMKKQQHQDDLVKQVGELKKENHEIIRNLSITNQLYVNMEAENAILRTQMAELTNRLESLNEIISYINNNSSNNYLFDDGITNDAAMINDCGFFNPNWINQPAIVASGNYMMY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0232 150 MobiDBLite consensus disorder prediction 1 47 - -
Prci9g0232 150 MobiDBLite consensus disorder prediction 1 17 - -
Prci9g0232 150 MobiDBLite consensus disorder prediction 18 47 - -
Prci9g0232 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Prci9g0232 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 128 - -
Prci9g0232 150 FunFam BZIP transcription factor 20 71 - -
Prci9g0232 150 CDD bZIP_plant_GBF1 23 73 IPR045314 GO:0003700|GO:0006355
Prci9g0232 150 Coils Coil 73 107 - -
Prci9g0232 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 67 IPR004827 GO:0003700|GO:0006355
Prci9g0232 150 SUPERFAMILY Leucine zipper domain 22 76 IPR046347 GO:0003700|GO:0006355
Prci9g0232 150 Pfam bZIP transcription factor 22 80 IPR004827 GO:0003700|GO:0006355
Prci9g0232 150 Gene3D - 20 74 - -
Prci9g0232 150 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0232 Prci-Chr9 10593193 10594352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0232 17 150 bZIP Transcription Factor Family AT4G34590 50.000 3.74e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci9g0232 bZIP_1 4.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0232 K25786 - gmx:778140 130.568