Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0211 ATGGCATACTCCAATAATGTTATGTCAGCTCCTCCAACAATGGCTGTAGTCATGGTCTTATTTCTCTTTTATAATGCTGCTGCCTTTGTAGAGGAGGAGAAACATGCTTTGATTCAGAGCAAATGGTGGAATTATCATTATAGCAATGATAGCTACCGTAACGACTCGGTCGACCCCTGTGAGTGGAAGGAGATAATTTGTAATGAACTTGGAAGTATTACTCAGATTTCGACACCAAGTATCCCTCCACAGAAGCCTCGCCTTGCAGATCTAAACTTCACTGCATTCCCTAATCTAGAATACATATTTCTTGATCGGATGGGGTTGGTGGGTGGCATTCCAACTGAGATTGGAACTCTTCGCAATCTCAACTATCTGTCCTTCTTTGACAACAATATTACGGGTACCATTATGACTCAAATAGGAGCTCTTCAAAATCTCACTCAATTACAATTGTTGGATTTGAGTGGAAACAAGTTAAGTGGAATCATTCCAACTCAGATTGGAAGTCTTAGCAATCTCACTTATCTACGCTTGTCTAATGACAGCCTTACTGGGGGGAAAAAAGTGATGTCATTGCATACACCATACACATTGACACATGATTCCGGAAGATGCAAGGCGGTCGTCAACAATAAGTCCTCTCTGCTCTCTCCCAATGATCATATGGAGAGTTTTTGGCCACGGTCACTTGGTACCATTCCAACTCAGATTGGAAGTCTCCAAAACCTCATCTATCTAGACTTGTCTAGCAACAATCTCATTGAACTTGCATACACTTTAGTTGTGACAGAAAAATGTGACATTTATAGTTTTGGAATGGTGGCATTAGAAACAATAATTGGAAGGCATCCTGGAGATTTAATACTATCTTTGATAGAGATCTCTAATCAAAGCATTTTCTTAAGAGATGTCACAAACTCAGGTCTCCCACTTCCGTTACAAAGAGATGCTCAAGATGTGATTCTTTGTGTCACAATAGCACTAGCATGCTTGCATCCCTCACCAAAATCTCGACCAACAATGAAGCAAGTCACTCACAAGCTCTCATTTTCCAACCTTGGATTAACTGTTCCATTCAATGACATTTCACTCCAGTCTTTGATAAATCAAGATATTTTCTAG 1125 0.4009 MAYSNNVMSAPPTMAVVMVLFLFYNAAAFVEEEKHALIQSKWWNYHYSNDSYRNDSVDPCEWKEIICNELGSITQISTPSIPPQKPRLADLNFTAFPNLEYIFLDRMGLVGGIPTEIGTLRNLNYLSFFDNNITGTIMTQIGALQNLTQLQLLDLSGNKLSGIIPTQIGSLSNLTYLRLSNDSLTGGKKVMSLHTPYTLTHDSGRCKAVVNNKSSLLSPNDHMESFWPRSLGTIPTQIGSLQNLIYLDLSSNNLIELAYTLVVTEKCDIYSFGMVALETIIGRHPGDLILSLIEISNQSIFLRDVTNSGLPLPLQRDAQDVILCVTIALACLHPSPKSRPTMKQVTHKLSFSNLGLTVPFNDISLQSLINQDIF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0211 374 PRINTS Leucine-rich repeat signature 150 163 - -
Prci9g0211 374 PRINTS Leucine-rich repeat signature 241 254 - -
Prci9g0211 374 Pfam Leucine rich repeat 142 184 IPR001611 GO:0005515
Prci9g0211 374 Gene3D Ribonuclease Inhibitor 30 214 IPR032675 -
Prci9g0211 374 FunFam Nuclear pore complex protein NUP107 30 189 - -
Prci9g0211 374 Gene3D Transferase(Phosphotransferase) domain 1 215 354 - -
Prci9g0211 374 SUPERFAMILY L domain-like 48 257 - -
Prci9g0211 374 SUPERFAMILY Protein kinase-like (PK-like) 256 360 IPR011009 -
Prci9g0211 374 PANTHER LEUCINE RICH REPEAT KINASE 2 92 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0211 Prci-Chr9 10281143 10288580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0211 16 254 Receptor kinase-like Gene Family AT2G25790 28.571 4.32e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci9g0211 LRR_8 8.4e-07 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0211 - - pcin:129320315 740.725