Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0199 ATGGGCGGAGAGAAAGGGTTATGGGCTTGGGATTTTCTGTGGCTCACTCTCTTTCTGATACTAATGGATGGAGTTATGAGCTCTCAAGTGCAGAACAAATCCTGTAGTCCGTCTCGCTGTGGCATTATCACAAACATCTCATATCCATTTCGACTGCGAGGCGATCCAGCGAATTGCGGCGATCCGATCTTCGAGCTAGCTTGTGAAAACAACGTCACTCTTGTTCATTTGTACAGCCGAACATACCGTGTGCTGGGAATCAACTACAACAACTTCACAATCCGACTCGTAGATCCTGGAATCGAGGAGGGAAATTGCTCCTCCCTCCCTCGATATTTCTTATCTCTATCCAATTTCACCGACGATGCATCCAGAGATCCTTACGATTGTTATACATATGATGCCTCCCGCACTGAGTTATACTTTCGCGGGTCCTTTGAGTTCCTTTCATTCAAGCACGTGGGGTACCTGAACTGCAGCGATCCAGTGAGGGACGACGCAGCGTACCTTGATACAGCTTCGTGCCTGAATTGGGAATCCAGAAAAGGAGGTCATTTGTATGCTGTGGCTGGAGATTTACGGGCTATGCAGTTCAAATCAGGGTGTAGTCTGAAATTTGTGGCCACCACCTCATTGTTGGTGCCTGATGGAAGTAAATCCTACGCTGAAATTCACAGAATGCTTTCTTACGGATTTGAGGTTTCATGGTGGAGGCAAGCTTGTGAGAAACGCCTCTGTGGTGGTCCCATGCGAGGAAATCTCTATTGTTGTAGGACTGGGTGGCTGTCAAAGCTGCGCTCATTTGCAGAAGGATTTTGCATTGGGGTTATACGCACAATGTACGTCACTAATGAAATAACAAATCTTCGTCCGTCCAAATTAAGAATAATCATTGGAAGAGTTGCTTTTACATACATCATAGCAAGACTTTTCTTTGGTACTGTATTCCTATTTACGCTGCTGCTTTATACATGCCATGGAAAATACTTATTTATGAATGAAGTTATCGAAGATTTTATACGACTTCATGACCTCATTCCAATAAGGTATTCCTACAGTGAACTAGAGACAATGACCAAGGGTTTCAAGAATAAATTAGGTGAAGGAGGCTTTGGAACAGTATTTAAAGGGAAGCTAAGTAGCGGACCATTTGTTGCTATCAAAATATTGGGTAAATCTAAAGCCAATGACCAAGAATTTATTAGTGAAGTAGCAACTATTGGAAGGATACACCATTCGAATGTGGTACACCTTGTTGGGTTTTGTGCAGAAGGATCAAAACGTGCTCTTGTATATGAATTCATGTCTCATGGATCTTTGGATAAATATATTTTTTCCAAAGAAGAAAGCATCTCCTTAAATTATCATAAAATACATGAGATATCTCTAGGAGTGGCTCGCGGAATTGCTTACCTTCATCATGGTTGTCATATGCAAATATTGCATTTTGATATCAAGCCCCATAATATTCTTCTTGATGATAACTTCATTCCAAAGATTTTAGATTTTGGACTAGCAAGATTATATTCTGTTGATGATACTACCATAACTTTGACTGCAGCAAGAGGAACGATAGGATACATGGCTCCTGAACTATTCTACAAGAATATTGGGGGTGTGTCTTATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATAGAAATGGCAAGCCAAAGAAGGAATTTGAATCCGCACGTAGAACATTCAAGCCAACTTTATTTTCCCTTATGGATTTATGACCAATTTGATGAAAAGAAAGATATACAAATGGAAGACAATTTGACAAAGGAGGAAAAAGATTTAGCAAAGAAGATGTTCATAGTAGCACTCTGGTGCATACAACTAAAACCTACTGATCGCCCTTCAATGAATAAAGTGATAGAGATGTTGGAAGCAAATAATGTCGAGAGTCTTGAAATGCCTCCTAAACCTTCTCTATATCCTAATGAAACAATTTTAGTGGATGATGGATCCAACTCTAACCAAACAACACCAACTATCTCGGTACATGCTCAAAGCATTTCAAGTGAGGGCATAAGTGATGGGATTTAA 2055 0.4039 MGGEKGLWAWDFLWLTLFLILMDGVMSSQVQNKSCSPSRCGIITNISYPFRLRGDPANCGDPIFELACENNVTLVHLYSRTYRVLGINYNNFTIRLVDPGIEEGNCSSLPRYFLSLSNFTDDASRDPYDCYTYDASRTELYFRGSFEFLSFKHVGYLNCSDPVRDDAAYLDTASCLNWESRKGGHLYAVAGDLRAMQFKSGCSLKFVATTSLLVPDGSKSYAEIHRMLSYGFEVSWWRQACEKRLCGGPMRGNLYCCRTGWLSKLRSFAEGFCIGVIRTMYVTNEITNLRPSKLRIIIGRVAFTYIIARLFFGTVFLFTLLLYTCHGKYLFMNEVIEDFIRLHDLIPIRYSYSELETMTKGFKNKLGEGGFGTVFKGKLSSGPFVAIKILGKSKANDQEFISEVATIGRIHHSNVVHLVGFCAEGSKRALVYEFMSHGSLDKYIFSKEESISLNYHKIHEISLGVARGIAYLHHGCHMQILHFDIKPHNILLDDNFIPKILDFGLARLYSVDDTTITLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLIEMASQRRNLNPHVEHSSQLYFPLWIYDQFDEKKDIQMEDNLTKEEKDLAKKMFIVALWCIQLKPTDRPSMNKVIEMLEANNVESLEMPPKPSLYPNETILVDDGSNSNQTTPTISVHAQSISSEGISDGI 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0199 684 SUPERFAMILY Protein kinase-like (PK-like) 345 632 IPR011009 -
Prci9g0199 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Prci9g0199 684 FunFam PR5-like receptor kinase 435 643 - -
Prci9g0199 684 Gene3D Transferase(Phosphotransferase) domain 1 435 641 - -
Prci9g0199 684 SMART serkin_6 360 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0199 684 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Prci9g0199 684 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Prci9g0199 684 ProSiteProfiles Protein kinase domain profile. 360 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0199 684 Gene3D Phosphorylase Kinase; domain 1 333 434 - -
Prci9g0199 684 Pfam Protein kinase domain 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0199 684 FunFam serine/threonine-protein kinase PBS1-like 333 434 - -
Prci9g0199 684 PANTHER RUST RESISTANCE KINASE LR10-RELATED 336 654 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0199 Prci-Chr9 8889670 8895867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0199 9 648 Receptor kinase-like Gene Family AT5G38260 34.737 6.23e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci9g0199 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0199 - - pcin:129321062 750.74