Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0158 ATGCTTCTTTCTGAGTCTGGGTTTTGGATCGTCAGATTAGCAAGTACTTCACAGTATTATCAGAGAATCGGAGATAAACTGGTCCCTTACCGGAAGATCATCGTCGACTGGGCCGGCACCGGAAACTTCACGTCGATTCAAGAAGCCATAAACTCAGTCCCTTCCAACAACAGCAATTGGGTTTCCATCTACGTCAAGGCAGGCATCTATAGGGAAAAACTGAAGATTCCAGATGATAAGCCTTATTTAGTTCTAAAAGGGGCAGGGAAGAGAAGAACTATTGTTGTTTGGGATGATCATGAAACAGTGGCACAGAGTCCTGCGTTTACGCTGCTAGCAGATAATGTTGTCGTCAGATGTTTGAGCTTTAGGAATTCGTACAATAATCCAATTAACAGTAAGAGCCGGGAAACCAGCGGTGGCGGGCAATGGTGGCCGGAGACAAGGCTTCTTCTTCGGGTAGGCTTCTATGGTTTACAAGACACATTGTGGGATGAGCAAGGAAGGCATTACTACAAACTTTGCACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCAGGCCAATCTATATTCGAGAGATGTTCAATATCAGTGATTGCCGGAGGTTTTATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGATTTGTGTTTAAGGATTGTCACGTGTTTGATGGCACGACATACTTGGGAAGGCCTTGGAGAAGTTATTCAAGAGTTCTCTTCTACAAAACCAATATGTCTAACGTTGTTGAACCAAAGGGCTGGCAGCCTTGGAATTTTGCTACTAATGTGAATCGGCTAACATTTGCAGAGTACGAGTGTTTTGGTGCTGGGTCTAACACATCCCAACGAGTGAGCTGGTCCAAGAATAAGCTTGATTTAGAATATGTGGAGCAAATGGCTAACATGAGCTTCATTGATTCTGAAGGATGGCTTCAGAATCAAATTTTCTGA 966 0.4317 MLLSESGFWIVRLASTSQYYQRIGDKLVPYRKIIVDWAGTGNFTSIQEAINSVPSNNSNWVSIYVKAGIYREKLKIPDDKPYLVLKGAGKRRTIVVWDDHETVAQSPAFTLLADNVVVRCLSFRNSYNNPINSKSRETSGGGQWWPETRLLLRVGFYGLQDTLWDEQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGGFITAQGRTNPNDANGFVFKDCHVFGXGTTYLGRPWRSYSRVLFYKTNMSNVVEPKGWQPWNFATNVNRLTFAEYECFGAGSNTSQRVSWSKNKLDLEYVEQMANMSFIDSEGWLQNQIF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0158 322 FunFam Pectinesterase 28 321 - -
Prci9g0158 322 ProSitePatterns Pectinesterase signature 2. 177 186 IPR033131 -
Prci9g0158 322 Pfam Pectinesterase 33 312 IPR000070 GO:0030599|GO:0042545
Prci9g0158 322 ProSitePatterns Pectinesterase signature 1. 57 76 IPR018040 -
Prci9g0158 322 Gene3D - 29 322 IPR012334 -
Prci9g0158 322 SUPERFAMILY Pectin lyase-like 30 318 IPR011050 -
Prci9g0158 322 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0158 Prci-Chr9 7547795 7554562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0158 31 263 Carbohydrate Esterase AT2G19150 41.079 8.36e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0158 - - qsa:O6P43_026793 425.246