Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0157 ATGTACAATCATCCTCCGGGAGAAGACGAAGAGAGGAGAGCACTTCCAGCATTAGCAGCTGCAGTGAGAGGAGACAAAAAAGCATTCTATGATTGTTCCTTCAAAGGTGTCCAAGACACCTTATTTGATCATACAGGTCGCGCCATTACTGCCATAACTGCTACATTCAAGAATTGCACTATCTATATTAAATCAGGATCAGAGGGTCGAAAAGGTAGTGTTATGGCAGCACAAAAGAGAAAATCCATTAACGAAACAAATGGGTATGTGTTCAATGGATTCTACGTGGATGGAATTGGAAAATCCCTCCTTGGGAGAGCTTATGGACCATATTCTAGGGCTATCTTCGCCAATTCCTGTCTCTCAAGTGTCGTCGACCCTGTGGGCTGGGGTGCTTGTGATCAACACGATGTGTAA 417 0.4412 MYNHPPGEDEERRALPALAAAVRGDKKAFYDCSFKGVQDTLFDHTGRAITAITATFKNCTIYIKSGSEGRKGSVMAAQKRKSINETNGYVFNGFYVDGIGKSLLGRAYGPYSRAIFANSCLSSVVDPVGWGACDQHDV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0157 138 Gene3D - 3 50 IPR012334 -
Prci9g0157 138 Gene3D - 51 137 IPR012334 -
Prci9g0157 138 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 15 134 - -
Prci9g0157 138 Pfam Pectinesterase 16 131 IPR000070 GO:0030599|GO:0042545
Prci9g0157 138 SUPERFAMILY Pectin lyase-like 16 131 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0157 Prci-Chr9 7395332 7396844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0157 16 132 Carbohydrate Esterase AT2G19150 37.594 4.90e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0157 - - pcin:129320411 273.478