Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0152 ATGGGAAAAAGAAATCGCGATAAAAAACATGACATGGCAGTGGAGAATAATGGTACTGGTGCTAGTACCAGTCATCATGGAAGATCTTGGAACATTCTTAATATTATGAAGTATCATCACTGGCCTCATAATGTCAAGAAAAGGCTCACACACAAGAAGAATAGTGGTGGAAAAAATCCTGCCTTTGATGGCCCAGGTAGAGCTGACGATTTGCAGGACTATGGGCCCAACTCAAAATTATCTAGTGTTGAAGAAATGCCAGTACAATCCACTTCACTGGCCAAACACTCTGTTAAAGCCAGACTGAAAGCACTTGTTACGGATGAGATAGCCAGAAAGAACAAGTGTCAACATAAAAGAAGTTCAACCTACCCTGTAAAGCCAAAACCACCAAACCAGCCCATTCCCATTCCCAACTTAGATCATTCAGAACTTAATCTTGTCTCTGAAAATAATCCCAAAATGGTTCCACACATTACTGACATGTTGGAGGAGGATCTGCCACTAGCAAGCTCAACAGCCAATAAAGAGATCTGTGTAGAATGTGGGACCATGTTTTCTAGGGATTCAATGGAGGATGATAATAATAGTATGGTTCATAAGCATCACAAGCCACCATCAGAATATCACAGAGCATTTATGAAGGAAACACTGAGCTACGAAGAGAAAGCAATGCATGCCAAGTTACTTACAACTGACGTCTCACCTTTTCTCTTCAAGGATTTCTTGGATGCTCTTGACATGATAAATTCAAATAAGGATTTTTTGTTAAAATTTTTGCAGCATCAACGTTCTCCTCTAGGATGCCACTTTCCTAACCAACAACAGGCAGCATCAACAGGAAAATTGAGACTGAATAAGTCTATTTCATTTCCGGTACCTGGTTCATCATCATCCACAATCAAAGGACAAAACACAGACAAAAAACCAGATGAAATGTTCATATCAAGAGATGTGAAAAGTGATAGTCAAACACAAATTGCAATATCCCAGTTTGAATCTTCAGAAAAAAGTGACCAGCAGCCTGTGTCATTGAACTCTTATTATGCATCAGTACCATCCCAGGTTAGAAATCCTAGGGCTATTAAGCGTTTCAAGGATCTTAGACAGAAGGTAAAACATGTTCTTGAAGAGAGCAAAAATGAGAAACGCCGTATAGCCATGGATGCTGTATATCACAAAGTTCCTCATGGAAATAAACTTCCCATAGAATCTAACAAGATTCCCAGATGTCCTACAGATTTTATTTCAGCAATTGAATCTCGCAGCTTTAAAAAGCATCAAATATCTCCAATGAGGACTTCATCTTTGAATGAGTCAGTTTGGACATATTCTCAGCTTTATGATACTTGTTTTAACAAAGCAGCTAAGTACCCTAGATCTGAAAGGTTAAAGTTGAAAGTAGAAGAGAAAAATTCAGTACTAAGGACCCCAAAATCCTTTCAAAGGTTTCTTTCACTACCTAATCTTAAAGATTACTTTTCTCAAAATGAGGAGCCTTCTTCGATTTTACCTCCACAGATTCCTATTAGAAAATTTAGAGAGAGAACCACTAGTCCAAGTACTAGTGTGGACAACATCACAACTCCAGAAAGTGTTTTAAAAGGTGTCCAAAGAGATATAGCCACCAGAAGCGATATAGGGGTGGTATCAGATGAAGAAGACAAGGACTCAAATCAGAATGAAAGCATAGGAATTGATGATTATTTTGGAAAGTTAAGTGACAGTGATGTCAATGAATCAACTTCTATGGTGGCTGAAACAAAATCAATCTCCTTCTCCGGCTCTAGCTTCCTGGATGATTCAATTAGCTCTGATGGGAAGCTGTCTTTACCAAAAGAATCAGAAGTAAATCCATGGCCAACAGATGGGTCTGATCACCTGACAGAGCAATTACTAGGGCTTGACATTGGAGACTATCATGAAGTGGTGAGCAGTGAAGATGATTTTCAGAAATTTGTGTTTCAGAACAAGAAGCACTTGAACGTGGGAATTCCTGACCTCGAAGTAGATGCAAACAGTGAAGCTGAATTTACCTATGTGAAAGGTGTATTAGAGCTATCAGGGTTATCCACAAGTCATGAATCACTTGGGACATGGTTTTCCGATGAACAACCAGTTGATCCCACAGTGTATGATGAACTAGAAGGTTGCTTACTGTTTGATCCTGAAAGTTCTAGAATTGAAGAAGCTGCTGGTGCTAATCATTGTAACCATTTGCTTTTGTTTGATTTGATCAATGAGATATTGATTGAGATTTTTGAAAGATCATACAGTTACTACCCAAAATCCTTGTCTTCTCTGTCTCATGTTTACCCAATACCAGTGGGAGATCAAGTTCTAAGACAAGTGTGGACACTAGTCAGGTGGTATCTGAACATAAATTCAGAGTTTTATCCATCTTTGGATTACCATGTGAGCAGGGACTTGGCAAGAAGTGATGGCTGGATGAATCTCCAGTTTGATTCTGAATGTGTGGGACTTGAGCTAGATGACTTGATTTTTAATGATCTTTTGGAGGAGGTCATCTGCAACTGA 2538 0.3897 MGKRNRDKKHDMAVENNGTGASTSHHGRSWNILNIMKYHHWPHNVKKRLTHKKNSGGKNPAFDGPGRADDLQDYGPNSKLSSVEEMPVQSTSLAKHSVKARLKALVTDEIARKNKCQHKRSSTYPVKPKPPNQPIPIPNLDHSELNLVSENNPKMVPHITDMLEEDLPLASSTANKEICVECGTMFSRDSMEDDNNSMVHKHHKPPSEYHRAFMKETLSYEEKAMHAKLLTTDVSPFLFKDFLDALDMINSNKDFLLKFLQHQRSPLGCHFPNQQQAASTGKLRLNKSISFPVPGSSSSTIKGQNTDKKPDEMFISRDVKSDSQTQIAISQFESSEKSDQQPVSLNSYYASVPSQVRNPRAIKRFKDLRQKVKHVLEESKNEKRRIAMDAVYHKVPHGNKLPIESNKIPRCPTDFISAIESRSFKKHQISPMRTSSLNESVWTYSQLYDTCFNKAAKYPRSERLKLKVEEKNSVLRTPKSFQRFLSLPNLKDYFSQNEEPSSILPPQIPIRKFRERTTSPSTSVDNITTPESVLKGVQRDIATRSDIGVVSDEEDKDSNQNESIGIDDYFGKLSDSDVNESTSMVAETKSISFSGSSFLDDSISSDGKLSLPKESEVNPWPTDGSDHLTEQLLGLDIGDYHEVVSSEDDFQKFVFQNKKHLNVGIPDLEVDANSEAEFTYVKGVLELSGLSTSHESLGTWFSDEQPVDPTVYDELEGCLLFDPESSRIEEAAGANHCNHLLLFDLINEILIEIFERSYSYYPKSLSSLSHVYPIPVGDQVLRQVWTLVRWYLNINSEFYPSLDYHVSRDLARSDGWMNLQFDSECVGLELDDLIFNDLLEEVICN 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0152 845 MobiDBLite consensus disorder prediction 288 304 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 1 26 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 288 309 - -
Prci9g0152 845 PANTHER PROTEIN TRM32 1 845 IPR044257 -
Prci9g0152 845 Coils Coil 362 385 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 546 562 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 75 94 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 49 94 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 115 135 - -
Prci9g0152 845 MobiDBLite consensus disorder prediction 545 566 - -
Prci9g0152 845 Pfam Domain of unknown function (DUF4378) 677 841 IPR025486 -
Prci9g0152 845 Pfam Protein of unknown function (DUF3741) 222 263 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0152 Prci-Chr9 6573867 6580537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0152 220 835 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 33.754 4.42e-81 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0152 - - pcin:129319794 1662.12