Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0148 ATGGAGTCTCTTGGTTATGTGGATGACCTCCTGAATTTCTCATCAGACATAGGTGAAGAAGATGAGGAGGATGATAAACCTAGGAAAGCCCTGTCTTCTCTTACCCTTAAATGTAGTGATCCTGCATCATTAAATGCTTTGAACGCAGATGATCCAAACCATTCATTTTCTGAGTTTGCAGAAGAAGAGCTTGAGTGGCTATCCAACAAAGATGCTTTCCCGGCTGTTGAAACATTTGTTGACATTCTCTCTATTCAACCAAACCTATCAAAGCCCCAAACCCCAGTCTCAACGCTTGAATACAGTGCAAGCAGTACCAACAGTAATAACAGTGCTAACAATGTTACCCTCTTAGACGGCTATAATCACACTAAGGTTCCTGTCCGACCACGAAGCAAGCGTCATAATAGGCAACCCCGTGGTGTTGCTGACATATCTAGCCGGCAAATTTGGCGGAACCAACCGAGTAACACGATTACCAAGCCAGAAGCAATGATAACAATCTCAGTAATAGGAAGGAAATGCCAGCACTGTGGAGCAGAAAAAACTCCACAGTGGCGGGCAGGACCCCTTGGGCCAAAAACTCTTTGTAACGCATGTGGGGTTAGGTACAAGTCTGGGCGACTTTTGCCTGAATACCGCCCTGCAAGTAGCCCTACATTTTGTAGTGAATTGCATTCAAATTCCCACAGGAAGGTAATTGAGATGAGGAAGCAAAAGCAAATGGGAAGCAACGGATGA 741 0.4494 MESLGYVDDLLNFSSDIGEEDEEDDKPRKALSSLTLKCSDPASLNALNADDPNHSFSEFAEEELEWLSNKDAFPAVETFVDILSIQPNLSKPQTPVSTLEYSASSTNSNNSANNVTLLDGYNHTKVPVRPRSKRHNRQPRGVADISSRQIWRNQPSNTITKPEAMITISVIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFCSELHSNSHRKVIEMRKQKQMGSNG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0148 246 ProSitePatterns GATA-type zinc finger domain. 175 200 IPR000679 GO:0006355|GO:0043565
Prci9g0148 246 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 172 232 - -
Prci9g0148 246 MobiDBLite consensus disorder prediction 91 117 - -
Prci9g0148 246 CDD ZnF_GATA 174 221 IPR000679 GO:0006355|GO:0043565
Prci9g0148 246 FunFam GATA transcription factor 166 245 - -
Prci9g0148 246 SMART GATA_3 169 219 IPR000679 GO:0006355|GO:0043565
Prci9g0148 246 MobiDBLite consensus disorder prediction 1 29 - -
Prci9g0148 246 MobiDBLite consensus disorder prediction 125 144 - -
Prci9g0148 246 Gene3D - 169 220 IPR013088 GO:0006355|GO:0008270
Prci9g0148 246 Pfam GATA zinc finger 175 209 IPR000679 GO:0006355|GO:0043565
Prci9g0148 246 ProSiteProfiles GATA-type zinc finger domain profile. 169 205 IPR000679 GO:0006355|GO:0043565
Prci9g0148 246 PANTHER GATA TRANSCRIPTION FACTOR 39 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0148 Prci-Chr9 6566270 6573024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0148 1 243 C2C2-Gata Transcription Factor Family AT3G24050 44.000 2.07e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci9g0148 GATA 1.1e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0148 - - gmx:100784527 338.961