Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0128 ATGGCTTCTCTTCTGCCATTTCAGGACCTCAATTGCTTCCCTAACCCTCACACTGCTATCAGTAACGCCACTGATCCAATCAATGTCGGACCCACTCCCTCCTCGAGGACGTGCTTTCCAACACTGGTGCCCAAGCTCGAGCCTTTGGACGATTTGTTCGAACCCCAAGAGCAAGAGCAAGCCCTTGGAAACATCATTTCAACTCCTAACCCTGAGAATGCATCAGCTAATGCTTGCGCTGGAATCCCACAAGGCGTGCCGATGGAAGACCATGTATATTCAGAGTTCAATCGAATTTCTCAAATGTTTTGGGCAGCATTTCCCGACAATGTACAGCAATCCGGAGATGACAACGTTTCAAACTCAGATTCGAGGGCAATTGTTCCTGTACCAAAGGAGAACACCCAGGTTTCTTCGGTGGTGGTTGCTACTCGGAAGCGGAGCTCCCAGCGAGTTAAGGAACTGGTAAGGGTTGGCGATATTAGGATCGAAGACGAAAGGCATCATCGTGCCGTAGTCAGAAGGACCAGGATGGTATACGACTCGTTGCGCATTTTGACGCCAATGGAGGAGAAGAAAAGTAGTGATGATTCAGCTAAGCGTAAGCGGCCTCGAGGTGATACGCGTGCTGCCGCCATGTTGAGATATCGTGGGATGTGGCTTAATCGAGATAAGCGGATAGTAGGTGCTATTCCAGGCATTCATGTTGGTGATTTGTTCCTTTATAGGATGGAACTGTTAGTAGTTGGGTTACATTGTCAAACTCAAGCCGGAATTGATTATCTTCCCGCAAGCATGAGTCCAAATAAGGAGCCAATAGCAACTAGCGTTATTGTATCAGGTGGATATGAGGATGATATAGATGATGGTGACGTTATAATCTATACAGGACATGGAGGACAAGATGCTAAGCATTCAAAGCAAGTTGCTCATCAGAAGTTGGAAGGAGGAAACCTTGCATTGGAAAGAAGCATGCAGTATGGGGTTGAGGTACGGGTTATTCGAGGGATTAAACATGAGGGAAGTGCTTCAAGTTCGAACAAGGTTTATGTGTATGATGGCTTGTACCGGATTGCTGCTTGCTGGTTTGAACTGGGTAAGTCTGGTTTTGGGGTTTACAAGTATAAACTTTTGAGAATTGATGGGCAAGAAAAATTGGGTAGTGCAATTCTTAAACATGCTCGGCTTCTAAGGGTTGATCCAATTTTTTCTGATTCTACGAGTTGTTTTAGTCTTGACATTTCGCTCAACAAAGAGAATACTCCTGTTCGTCTCTTCAATGATATTGATGCTGATGATGGTCCTCTTCATTTTGAGTATCTTACAAGGACTAGTTTTCCTCATTTTGTATTTCATCAAAGTGGAAGTGCTACTGGCTGTGAGTGTGTGGAAAGTTGTACTGATGGTTGTTTCTGTGCTTTGAAAAATGGAAATGAATTTCCTTATAATAGAAATGGGATTCTATTAAGAGGGAAGCCAGTAGTTTTTGAATGTGGTCCATTCTGCCGTTGTCCTCCACATTGTCAAAATCGTGTGACACAAAAAGGGATGAAAGTTAGACTGGAAGTATTTAGGTCTAGAGAAACAGCAACAGGTTGGGGAGTTAGGTCCCTGGATGTTATTCATGCTGGTGCTTTTATCTGTGAATATACAGGGGTTGTACTTACAACAGGGCAAGCACAAATTTTGACTATGAATGGTGATTCAATGGTCTATCCAAATCGATTTCCTGATAGGTGGGCAGAATGGGGGGATTTATCTCAGATATACCCTAATTATATGCGTCCATCATATCCATCAATTCCTCCGTTAGATTTTGCCTTGGATGTATCGACAATGAGGAATGTTGCTTGCTATATCAGGCGCAGTGCAGCTCCAAATGTGTTCGTTCAGTTTGTTCTCTATGATCACAATAACTTGATGTTTCCTCACCTTATGCTTTTTGCAATGGAGACTATCCCTCCATTGAGGGAGCTCAGTCTAGATTATGGAGTGGCTGATGATTGTACAGGAAAGCTCTTAATATGTAACTGA 2034 0.4351 MASLLPFQDLNCFPNPHTAISNATDPINVGPTPSSRTCFPTLVPKLEPLDDLFEPQEQEQALGNIISTPNPENASANACAGIPQGVPMEDHVYSEFNRISQMFWAAFPDNVQQSGDDNVSNSDSRAIVPVPKENTQVSSVVVATRKRSSQRVKELVRVGDIRIEDERHHRAVVRRTRMVYDSLRILTPMEEKKSSDDSAKRKRPRGDTRAAAMLRYRGMWLNRDKRIVGAIPGIHVGDLFLYRMELLVVGLHCQTQAGIDYLPASMSPNKEPIATSVIVSGGYEDDIDDGDVIIYTGHGGQDAKHSKQVAHQKLEGGNLALERSMQYGVEVRVIRGIKHEGSASSSNKVYVYDGLYRIAACWFELGKSGFGVYKYKLLRIDGQEKLGSAILKHARLLRVDPIFSDSTSCFSLDISLNKENTPVRLFNDIDADDGPLHFEYLTRTSFPHFVFHQSGSATGCECVESCTDGCFCALKNGNEFPYNRNGILLRGKPVVFECGPFCRCPPHCQNRVTQKGMKVRLEVFRSRETATGWGVRSLDVIHAGAFICEYTGVVLTTGQAQILTMNGDSMVYPNRFPDRWAEWGDLSQIYPNYMRPSYPSIPPLDFALDVSTMRNVACYIRRSAAPNVFVQFVLYDHNNLMFPHLMLFAMETIPPLRELSLDYGVADDCTGKLLICN 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0128 677 Gene3D SET domain 391 677 IPR046341 -
Prci9g0128 677 ProSiteProfiles YDG domain profile. 229 379 IPR003105 -
Prci9g0128 677 Pfam SET domain 532 664 IPR001214 GO:0005515
Prci9g0128 677 Pfam SAD/SRA domain 228 383 IPR003105 -
Prci9g0128 677 ProSiteProfiles SET domain profile. 519 664 IPR001214 GO:0005515
Prci9g0128 677 SUPERFAMILY PUA domain-like 210 392 IPR015947 -
Prci9g0128 677 Gene3D - 223 390 IPR036987 -
Prci9g0128 677 SMART preset_2 411 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci9g0128 677 SMART set_7 519 670 IPR001214 GO:0005515
Prci9g0128 677 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 82 677 IPR025794 GO:0016571
Prci9g0128 677 Pfam Pre-SET motif 415 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci9g0128 677 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 114 665 - -
Prci9g0128 677 SUPERFAMILY SET domain 410 665 IPR046341 -
Prci9g0128 677 ProSiteProfiles Pre-SET domain profile. 458 516 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci9g0128 677 SMART G9a_1 224 383 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0128 Prci-Chr9 2826928 2833588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0128 145 666 Su(var)3-9 homologs AT5G04940 38.941 1.05e-106 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci9g0128 SAD_SRA 1e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0128 K11420 - cave:132179232 865.914