Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0043 ATGTCGTCATTGTCGTCGTCGGCAAATCCACCGTGCGCCGCCTGCAAGATGCAGCGGAGGAAATGCACGGTGGGCTGCGTGTTTGCGCCATATTTTCCGGCGGACAATCCTCGGAAGTTTGCTTGCGTGCACAAGGTTTTTGGAGCGAGCAATGTGGCCAAGATTCTGAACGACATTAACGTAGTGCAGCGTGAGGACGCCGTCAGATCCTTGGCTTATGAAGCCGAGGCCCGACTCCGGGACCCCATCTACGGCTGCGTCGGCATCATCTCCGTCCTCCAGCACCGGCTGAATCAGCTGCAGGATGAACTCGTCGACGCCAGAAAAGAACTCGCCACCTATATTGGTCCTCAGGCCTTGCTTCCCAATAACCATCATGTGATGGGATTCAATGGGCAAGAGCTTTTGACTTTCAATGGCGGCGGCTGCGGCGGAGGCCGCCATGGTGGATACCGGCCACTGGGCCCAAGCAATGTGGGTCATCAAGTTGAAGCACATCATCATCATCAGCTTGAGGTGCAATCTCAGCAGTGGACGTGGTCACAGAAAAGCGAGGCACGTTGGGCTACGGGTCCATATACTCGAGCATTATGTGGAATCTGA 603 0.5556 MSSLSSSANPPCAACKMQRRKCTVGCVFAPYFPADNPRKFACVHKVFGASNVAKILNDINVVQREDAVRSLAYEAEARLRDPIYGCVGIISVLQHRLNQLQDELVDARKELATYIGPQALLPNNHHVMGFNGQELLTFNGGGCGGGRHGGYRPLGPSNVGHQVEAHHHHQLEVQSQQWTWSQKSEARWATGPYTRALCGI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0043 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 164 - -
Prci9g0043 200 Coils Coil 90 110 - -
Prci9g0043 200 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Prci9g0043 200 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0043 Prci-Chr9 1182499 1183298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0043 6 171 AS2 family AT5G66870 56.886 5.66e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci9g0043 LOB 1.7e-40 No_clan