Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0041 ATGGAAGTTGACAAGAGAAGAATGGGTGGTGGCAACAACATAAGCTCAGTATTCTATGCAGACTCATACCATCCCATTCAAGCTGGCAGCATAGACGGGACAGATATTCTTCCTCACGATAATGCTGTTTATCGAGCTCTTCTCTGTTCCTCTGCTGGCCTCTACGACCCATTTGGCGATCCCAAGGCCACGGGCGACCCATATTGCACTGTCTTCGTAGGCCGCCTCTCTCGCCTCACCACAGAAGAAACCCTTCGCAAAGTTATGAGCAAGTATGGTCGGGTGAAGAACTTACGCTTGGTTAGGGATATTGTAACTGGAGCCTCCCGTGGCTATGCTTTTGTTGAGTATGAAACTGAAAGTGAGATGCGGCGTGCTTATGAGGATGCTCATCATTCTATTATTGATGATTGTGAAATTCTAGTTGATTATAACAGACAGCAGTTGATGCCTGGGTGGATTCCTAGAAGGTTAGGTGGTGGCCTTGGTGGTAAGAAGGAATCTGGACAACTTCGTTTTGGGGGAAGGGAAAGGCCATTTCGAGCTCCTCTGAGACCAATACCATACAAGGATTTGGAGAGGCTTGGCATTCCACCACCTCCTGAAGGAAGATACATGTCACGCTTTCAGATCCCATCACCTCCTGGAATTAAAAAGGGTGATCTAGACAGGGAAGAAGGCTCTCGTAGAAGGAGTTCAAATAATAGGATCGAAGGTGCCATCAAATCTCTTGCTGATGGGAATTGTAAGGGTAATTCAATTCACCGAGAGGACTATGCTCATCAAAGGAGCTATGTGGAAAGGAGAGAGGAGAGAGATGGGCATTACTATTGTAGGAGTTTCTCTGACAAGGAGCGTCATTCCAGGAGATCTGATGAAAGGAGGGAACACTCTCGGAAAAGGAAAGAAAGAGACGAACACTCTACAAGGAGGCCAAAATGTGGCCGTCATTCTCATCGTGACGAATAA 969 0.4675 MEVDKRRMGGGNNISSVFYADSYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDPKATGDPYCTVFVGRLSRLTTEETLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETESEMRRAYEDAHHSIIDDCEILVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYKDLERLGIPPPPEGRYMSRFQIPSPPGIKKGDLDREEGSRRRSSNNRIEGAIKSLADGNCKGNSIHREDYAHQRSYVERREERDGHYYCRSFSDKERHSRRSDERREHSRKRKERDEHSTRRPKCGRHSHRDE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0041 322 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 147 IPR000504 GO:0003723
Prci9g0041 322 SMART rrm1_1 70 143 IPR000504 GO:0003723
Prci9g0041 322 FunFam Small nuclear ribonucleoprotein U11/U12 subunit 35 56 177 - -
Prci9g0041 322 MobiDBLite consensus disorder prediction 218 236 - -
Prci9g0041 322 SUPERFAMILY RNA-binding domain, RBD 57 175 IPR035979 GO:0003676
Prci9g0041 322 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 18 298 - -
Prci9g0041 322 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 140 IPR000504 GO:0003723
Prci9g0041 322 Gene3D - 56 176 IPR012677 -
Prci9g0041 322 MobiDBLite consensus disorder prediction 191 238 - -
Prci9g0041 322 MobiDBLite consensus disorder prediction 268 322 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0041 71 142 Eukaryotic Initiation Factors Gene Family AT2G23350 30.556 7.13e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0041 K13155 - zju:107412914 406.757