Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0036 ATGGAAGAAGTTTGTTTAAATAGTGGGCCAATTTTTTATGAATGTGATGAGTTTGATGTTGAGAACTCTTCTGTATCAGAGCATGATCAGGAATCCTTGGACCCAAGATCAAAGAACCATCCACCTCCAACTGTGGGTCTGGAGTTTGATTCTTTTGAAGAAGCTTACAACTTTTACAATGTTTATGCTAAAGAACAAGGTTTTGGCATTAGAGTGAGCAACTCATGGTTTAGATCAAGGAGAAAAGAGCGATATAGAGCAAAACTCAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGTGAAGCCCATAATCCAAGACCAGAAACAAGAACTGGTTGCCCTGCAATGATAGTCATTAGGATGGTGGACTCCAAAATATGGAGGATAGTGGAAGTTGAACTGCAACACAACCATCAAGTGAATCCAGGAATTAAACGGTTCTACAAGTCACATAAGAAAATGATACTTGCAGCCAGAGAAGCACAACCACCACCAGATCCTATTACAGAAATACATACCATTAAATTGTATCGAACAGCTGTCATGGATGCTGGTTATTATAGATTCTCCAATTTTGTTGAAGGACAGGAGATGAACTTCGATAATTTGAAATATTTGGAACTTAAAGAAGGGGATGGCCATGCTATTTATAATTATTTTTGCCGAATGAAACTGACAAACCCAGATTTCTTTTACTTATTTGATATTGATGATGATGGGCACCTAAGAAATGTGTTTTGGGCTGATGCCAGGTCAAGGGTGTCTTACAGTTACTTTAATGACATTGTTATTATAGATACAACTTGTTTGGCAAACAAATATGAGATCCCTCTGATATCATTTGTTGGCGTAAGCAACCATGGACAGTCAGTGCTACTGGGCTGTGGCTTCCTTGGGTATGAAAAGGTTGATTATTTTGTTTGGATATTTAATGCATGGCTAAAATGTATGCTTGGTTGCCCACCACATGTTGTTATTACTGACCAGTGCAAGCCCTTGCAAAGTGCAGTTGCTCAGGTTTTTCCTCATGCTCGTCATTGTTATTCTTTGCAGTATATCATGCAGAGAGTTCCTGAAAAGTTGGGCGGGTTGAAGGGATATGAAACAATCAAAAGGCAACTGAATAGGGCAGTTTATGAGTCCTTAAAGATAGTCGAATTTGAAAATTATTGGGCTGATATGATGAAGCAGCATGGATTGGGGGATAATAAATGGCTTCAAATATTGTATAACGATAAGCATCTGTGGGTTCCGGTTTACCTCAAAGACACTTTTTTTGCAGGAGTGGTCCCTACAAAAGAGAATGAGGGCTTGATTGCATATTTTGATGGATATGTACACAAGCATACATCCTTCAAGGAATTCATTGATAAGTATGATCTAGCTCTACATAGGAAGAACTTGAAAGAAGCCACGGCAGAGTTGGAGTCAAGGGAATCAAGTGTTGTTTTGAATACAAGATGTAATTTTGAACTGCAGTTATCAAAGTTGTACACAAAAGAAATCTTTAGAAAATTCCAGTCTGAGGTTGTGGGCATGTACTCCTGCTTCAATACAAGACAGGTAAATGTTAATGGATCTATAATAACATATATAGTGAAAGAACGAGTTGAAAATGGGGGAAAGGAGGAGGTTAAAAAATTTGAAGTCTTGTATGAGGCAAATGAACCAGACATTCGGTGTATCTGCGGTTTGTTCAATTACAAAGGTTATCTATGTAGGCATGCACTGAATGTTCTCAATTATACTGGTGTGGAGGAAGTCCCATCTCGGTACATTCTGCAGCGTTGGAAAAAAGATTTCAAACAAAAGTTCGTTCACGATCATGTCTCTAGTAACGTTGATACATACAGCCCTGTTGATTGGCATAAACAACTTTTTCATAATGCCCTTTCAGTGCTAGAAGAAGGGGCACAATCGCTAGAGCATTACATGATTGCTTTACTAGAATTGGAAGAGTTGTTAAAAAAGTTTGATCTGCTGGAGAATAACTCATTGTAA 2001 0.3833 MEEVCLNSGPIFYECDEFDVENSSVSEHDQESLDPRSKNHPPPTVGLEFDSFEEAYNFYNVYAKEQGFGIRVSNSWFRSRRKERYRAKLSCSSAGFKKKSEAHNPRPETRTGCPAMIVIRMVDSKIWRIVEVELQHNHQVNPGIKRFYKSHKKMILAAREAQPPPDPITEIHTIKLYRTAVMDAGYYRFSNFVEGQEMNFDNLKYLELKEGDGHAIYNYFCRMKLTNPDFFYLFDIDDDGHLRNVFWADARSRVSYSYFNDIVIIDTTCLANKYEIPLISFVGVSNHGQSVLLGCGFLGYEKVDYFVWIFNAWLKCMLGCPPHVVITDQCKPLQSAVAQVFPHARHCYSLQYIMQRVPEKLGGLKGYETIKRQLNRAVYESLKIVEFENYWADMMKQHGLGDNKWLQILYNDKHLWVPVYLKDTFFAGVVPTKENEGLIAYFDGYVHKHTSFKEFIDKYDLALHRKNLKEATAELESRESSVVLNTRCNFELQLSKLYTKEIFRKFQSEVVGMYSCFNTRQVNVNGSIITYIVKERVENGGKEEVKKFEVLYEANEPDIRCICGLFNYKGYLCRHALNVLNYTGVEEVPSRYILQRWKKDFKQKFVHDHVSSNVDTYSPVDWHKQLFHNALSVLEEGAQSLEHYMIALLELEELLKKFDLLENNSL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0036 666 Coils Coil 461 481 - -
Prci9g0036 666 Coils Coil 644 664 - -
Prci9g0036 666 Pfam SWIM zinc finger 556 582 IPR007527 GO:0008270
Prci9g0036 666 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Prci9g0036 666 Pfam FAR1 DNA-binding domain 57 142 IPR004330 -
Prci9g0036 666 SMART 26again6 559 586 IPR006564 GO:0008270
Prci9g0036 666 Pfam MULE transposase domain 262 355 IPR018289 -
Prci9g0036 666 MobiDBLite consensus disorder prediction 24 43 - -
Prci9g0036 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 658 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0036 Prci-Chr9 1000640 1003655 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci9g0036 MULE 9.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0036 K17604 - gmx:100811666 1075.08