Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0016 ATGATGCAGACAACCACTGCTATCATCTCATCATCATCAATTGCTCTGCTTTCTTTCCTTTCTCATTTTATCATCCTAACTGCTCAGCAAGACTTCATATATCATCGGTGTTACAATGGAGCTGGTAACTACACTAACACAAGTGCCTACCAATCCAAACTCAACCTCCTCCTTTCTAATCTCACTTCCAACAACAAAATTGACTATGGCTACTACACTTCCTCTCAAGGCCAAAACCCTAACAGAGTCAATGCCCTTGGACTATGTAGAGCAGATATCAAGCCAGACTCTTGCCGTAGTTTCCTCAACAACGCCACAAGCCTTCTTCGAAGGCTATGTCCAAATCAGAAGGAAGCATATGGATACAATGATGGATGCATTCTAAGATACGCTAATCGTTCCATGTTTGGGATTAACCAAGATCCAGATTTTTCTATCTTCATGTGTAACCCAAATAACGCGACAGACATTAAGTACAGTGAGGCCCTTGATAGTCTGATGAGAAGGCTGAGAAGTAAGGCGGCGGCTGGCAGTACTCGTTGGAAGTTCGCGGCGAACACGACAACAACTTTGTTTCAAAATATATATGGGCTTGTTCAGTGTATGCCTGATTTGTCTGAGCAAGATTGTGATGACTGCTTGGAGAAGTCGATCTCAAGCATCCCCTACTATTGTAACAACAGGATTGGTGGAAGGATTATCAAAATGAGTTGCAATATTAGATATGAGAATTATCGCTTCTATGATACTGAAGTTGTTGATTCATTATCTTCACCTCCTCCTGCTTCTCCGCCTTCCAACACATCTTCCACACAAGCAGGAACGATTGATTCACCAAAAGGAAATAGCAACACATCAAGAACTGTCACAATCGTAGTTGTGCCACTTGGTGTTTTTATCGCACTTCTTATTTTGATATGCATCTATTTTGCTGTTCGGGAATCAAAGAGAACAGTTGAAATTGACCAACCTGAAGCAAATGATGATGAAATTAAACCAATCGAGTCAATGCAATTCAATTTTAACACCATCAGACTCGCTACAGATAACTTCTCTGTTGTCAATAAACTTGGACAAGGAGGATTTGGATCAGTGTACAAGGGTAGGCTTCCCAATGGACAAGACATTGCTGTCAAAAGGTTGTCAATGAATTCTATGCAAGGAGATGCAGAATTTAAGAATGAAGTGCTCTTAGTGGCTAAACTCCAACATCGTAATTTAGTGAGATTACTTGGTTTTTCTTTAGAAACAAATGAAAGGCTTCTCGTTTATGAATTTCTTCCCAATAAAAGTCTTGATTACTTATTGTTTGATTCAAGTGAACGTGCTCAATTGAATTGGGTGATACGCTACAAGATTATAGGAGGCATTGCTCATGGTCTTCTTTATCTTCATGAAGATTCAAGACTACGTGTTATTCATCGAGATCTCAAACTAAGTAATATTCTTTTAGATGAAGAGTTGAATCCCAAAATATCAGATTTTGGCATGGCAAAGCTATTTGTTATAGACCAAACTCAAAGTAATACAAGTAGAATAGTTGGAACTTATGGATATATGGCACCAGAATATACAATGCATGGACAATACTCTGTCAAATCAGATGTTTTCAGTTTTGGCATATTGGTTTTAGAGCTTATAAGTAGCAGAAAGAACAGCAGCATCTTTGATGAAGAGAATGCACATGATGTTTTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAGTCATGAATATAGTAGATCTTGTATTAAACGATGGTTCGAGAAATGAAGTAATGAGATGCATCTATATTGGATTATTATGTGTTCAAGAAAATGTGGCTGACAGGCCAACCATGGCTTCAGTTGTACTTATGTTGAATAGCTTCTCTTCGTCTCTCCCTTTACCTTCAAGACCTCCACTTTTAGTGAGTACAACTCAGAGGCAACAAGATCAAGTGAACCAAGAAGTAACACTATTCAAGGGAACAATAGTAGAGCTTTGA 1989 0.3876 MMQTTTAIISSSSIALLSFLSHFIILTAQQDFIYHRCYNGAGNYTNTSAYQSKLNLLLSNLTSNNKIDYGYYTSSQGQNPNRVNALGLCRADIKPDSCRSFLNNATSLLRRLCPNQKEAYGYNDGCILRYANRSMFGINQDPDFSIFMCNPNNATDIKYSEALDSLMRRLRSKAAAGSTRWKFAANTTTTLFQNIYGLVQCMPDLSEQDCDDCLEKSISSIPYYCNNRIGGRIIKMSCNIRYENYRFYDTEVVDSLSSPPPASPPSNTSSTQAGTIDSPKGNSNTSRTVTIVVVPLGVFIALLILICIYFAVRESKRTVEIDQPEANDDEIKPIESMQFNFNTIRLATDNFSVVNKLGQGGFGSVYKGRLPNGQDIAVKRLSMNSMQGDAEFKNEVLLVAKLQHRNLVRLLGFSLETNERLLVYEFLPNKSLDYLLFDSSERAQLNWVIRYKIIGGIAHGLLYLHEDSRLRVIHRDLKLSNILLDEELNPKISDFGMAKLFVIDQTQSNTSRIVGTYGYMAPEYTMHGQYSVKSDVFSFGILVLELISSRKNSSIFDEENAHDVLSFAWKNWREGTVMNIVDLVLNDGSRNEVMRCIYIGLLCVQENVADRPTMASVVLMLNSFSSSLPLPSRPPLLVSTTQRQQDQVNQEVTLFKGTIVEL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0016 662 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Prci9g0016 662 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 135 - -
Prci9g0016 662 Pfam Protein kinase domain 352 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0016 662 FunFam Cysteine-rich receptor-like protein kinase 10 144 247 - -
Prci9g0016 662 Pfam Salt stress response/antifungal 149 245 IPR002902 -
Prci9g0016 662 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Prci9g0016 662 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Prci9g0016 662 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Prci9g0016 662 ProSiteProfiles Protein kinase domain profile. 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0016 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci9g0016 662 SUPERFAMILY Protein kinase-like (PK-like) 339 641 IPR011009 -
Prci9g0016 662 SMART serkin_6 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0016 662 Gene3D Phosphorylase Kinase; domain 1 312 426 - -
Prci9g0016 662 FunFam Cysteine-rich receptor-like protein kinase 10 313 426 - -
Prci9g0016 662 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Prci9g0016 662 CDD STKc_IRAK 357 622 - -
Prci9g0016 662 Gene3D - 142 247 IPR038408 -
Prci9g0016 662 Gene3D - 29 135 IPR038408 -
Prci9g0016 662 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 641 - -
Prci9g0016 662 FunFam cysteine-rich receptor-like protein kinase 10 427 628 - -
Prci9g0016 662 MobiDBLite consensus disorder prediction 267 283 - -
Prci9g0016 662 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0016 Prci-Chr9 588059 625738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0016 42 640 Receptor kinase-like Gene Family AT4G21410 48.371 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci9g0016 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0016 - - cave:132170294 730.324