Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0002 ATGGCCGGCGTGTCCATGTCGGATATGTATCCGACACGGACACGCGTTCAGTACGCAGGAACGGGCGCGTCCCTTTTCCCAGTTTCTGGCAGACGCAGGCGGACGCGGCTTCACGGTTCACTCTGTGTCGCTGCCCTCACCCGCTCATCGTCTGCTCTGCCTCAGTCTTCGTATTCGACCGTCTGCTCTAGCTCAACATCTTCGACCGTCTGCTTTGGCTCAACGTCTTCAACCGTCTGCTCTGCCTCACCATCGTTCTTCAGCTTCATTGGAAATAGCAACATATCAAGAACTGTCACAATCGTTGTTGTGCCACTTGGTGTTTTTATCGCACTTCTTATTTTGATATGCATCTATTTTGCTGTTCGGAAATCAAAGAGAACAGTTGAAAATTCAAATGAACGTGCTCAATTGAATTGGGTGATACGCTACAAGATTATAGGAGACATTGCTGGTGGTCTTCTTTATCTTCATGAAGATTCAAGATTACGTGTTATTCATCGAGATCTCAAACCAAGTAATATTCTTTTAGATGAAGAGTTGAATCCCAAAATATCAGATTTTGGCATGGCAAAGCTATTTGTTGTAGACCAAACTCAAAGTAATACAAGTAGAATAGTTGGAACTTATGGATATATGGTACCAAAATATGTAATGCATGGACAATACTCTGTCAAATCAAATGTTTTCAGTTTTGGCATATTGGTTTTAGAGCTTATAAGTGGCAGAAAGAACAACAGCATCTTCGATGAAGAGAATTCACATGATGTTTTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAGTCATGAATATAGTAGATCCTGTATTAAACAATGGTTCGAGAAATGAAGTAATGAGATGCATCCACATTGGATTATTATGTGTTCAAGAAAATGTGGCTGACAGGCCAAACATTGCTTCAGTTGTACTTATATTGAATAGCTTCTCTTTGTCTCTCCCTTTACCTTTAAGACCTCCACTTTTAACGAATAGTACAGGTTCAAGTGAGGTACATTTTAATGAGTACAGCTTAGAGGCAACAAGATCAAGTGAACCAAGAAGTAACACTATTCGAGGTTCAATAAATGAGGCCTCAATTACTGAACTATATCCATGTTAG 1125 0.4071 MAGVSMSDMYPTRTRVQYAGTGASLFPVSGRRRRTRLHGSLCVAALTRSSSALPQSSYSTVCSSSTSSTVCFGSTSSTVCSASPSFFSFIGNSNISRTVTIVVVPLGVFIALLILICIYFAVRKSKRTVENSNERAQLNWVIRYKIIGDIAGGLLYLHEDSRLRVIHRDLKPSNILLDEELNPKISDFGMAKLFVVDQTQSNTSRIVGTYGYMVPKYVMHGQYSVKSNVFSFGILVLELISGRKNNSIFDEENSHDVLSFAWKNWREGTVMNIVDPVLNNGSRNEVMRCIHIGLLCVQENVADRPNIASVVLILNSFSLSLPLPLRPPLLTNSTGSSEVHFNEYSLEATRSSEPRSNTIRGSINEASITELYPC 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0002 374 FunFam cysteine-rich receptor-like protein kinase 10 123 321 - -
Prci9g0002 374 SMART serkin_6 100 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0002 374 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 132 328 - -
Prci9g0002 374 SUPERFAMILY Protein kinase-like (PK-like) 135 344 IPR011009 -
Prci9g0002 374 ProSiteProfiles Protein kinase domain profile. 13 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0002 374 Pfam Protein kinase domain 144 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0002 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Prci9g0002 374 Gene3D Transferase(Phosphotransferase) domain 1 126 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0002 Prci-Chr9 146748 161950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0002 131 333 Receptor kinase-like Gene Family AT4G21410 60.386 1.77e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci9g0002 Pkinase 2.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0002 - - pcin:129320355 672.159