Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci99g0003 ATGGAGTACAACATCCCTCCTACCAGCAACCATAACTCATCAACAGCGTCATCTTCGAAGGCGAAAAAAAAGAGCGGGAAGAAAAGCAAGGGAGGAGTGAAGCTTTCCACTGATCCACAGAGCGTGGCGGCTCGAGAACGAAGGCATCGAATCAGCGATCGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGGAGTAAGATGGACACAGTGTCCATGTTGGAGGAAGCGATCCATTACGTGAAGTTTCTGAAAACTCAGATATGGCTCCACCAAACCATGATCAGCTCTGTTGACGATGACCTTCCACTTCCCAACCATGAACAGTTCACTTCGCTTCAACAAAACCCATCATCTTCTTCTTCCGTGGGTTCTGTGCAGAATTTGACACAGATACCACTGGAACAGTATTGCTGCTTCCAAAATGAAGCGGCAACAACAATATTGGACGCCGATATGAACTATTGGCCAGCGTAG 477 0.4801 MEYNIPPTSNHNSSTASSSKAKKKSGKKSKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMISSVDDDLPLPNHEQFTSLQQNPSSSSSVGSVQNLTQIPLEQYCCFQNEAATTILDADMNYWPA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci99g0003 158 SMART finulus 41 90 IPR011598 GO:0046983
Prci99g0003 158 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 8 131 IPR045843 GO:0003700|GO:0006355
Prci99g0003 158 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Prci99g0003 158 MobiDBLite consensus disorder prediction 1 20 - -
Prci99g0003 158 Gene3D - 40 93 IPR036638 GO:0046983
Prci99g0003 158 MobiDBLite consensus disorder prediction 1 49 - -
Prci99g0003 158 FunFam Transcription factor LAX PANICLE 38 101 - -
Prci99g0003 158 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Prci99g0003 158 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 96 IPR036638 GO:0046983
Prci99g0003 158 MobiDBLite consensus disorder prediction 107 125 - -
Prci99g0003 158 CDD bHLH_AtIND_like 36 95 - -
Prci99g0003 158 MobiDBLite consensus disorder prediction 106 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci99g0003 27 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 52.055 4.08e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci99g0003 HLH 4.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci99g0003 - - qsa:O6P43_016570 156.377