Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci997g0003 ATGGCTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAACTGTTGTGATTGGGTTCACAAACAAAAGCAGTCGAGGAATTCAAAGATCAGACAGCCAGATGGCCCTTTCAAAGAAGCTTTTCTTTCATCTTGTACCAGCTGTTGGAGCATGTGGTTCATTGTTGGACATGATATTTCTATGGAGGAGAGAAATTAACAGGCACTTTGTTGGTTATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAGGTGTGTCAGCAGTCATTATATGCTTTGCAACTATGTTTTGTGTTACTGGTGGATTCTGAAGCCACTATTCTGGATCTTCCATTTGCTTACAAAGTTCCCATTGCTGGAGACTCCAATATGTGTTGTGGAAAGCTCTATTCTTCTCTTGAATATCACATTTGGCATAGCCATCAATGTCATAAGAGTAAAAACATTATCTTCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTAGCCATTGCGACCCTGAAGAAAAAACTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTCGATGATCTTTTGCAACTTCCTCGAGACTTGGATCCTTCTTCCTGTCATGATATAATTTTGACCTGTTGGCAAGCACAACTGAGAAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTCTGCTGTGCATATGGATGGCCTTATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCTGGACCATTGCTTCTCAATAAACTGATCCGGTTTCTTCAACAAGGCACAGAGAGTTTTGATGGATATTTATTTGCCATGTCCTTGGGCCTCACATCTGTAATTAAATCCTTTTTAGATACACAATATAGTTTTCATCTTTCCAAACTGAAGCTAAAGCTACGGTCTAGTATCATGACTCTAATCTATCACAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTTGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATATGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCGTTTCTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATATCAAAATTGATTGCAGATGCAACTGAGAAAATGATGAAGCAGAAGGATGAACGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGATTGGCTGATGGAGACAAGATCTTCTGAACTGAAACACTTGGCTACTCGGAAGTACTTGGATGCATGGTGTGTCTTCTTTTGGGCTACGACGCCAACTCTCTTTTCTCTTTTTACATTTGGACTCTATGCATTGATGGGGTACCAACTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACGTTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTGTATCCTCCAGGCGGTTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAGATCAATTCATGTTCCTTGCCATTCCACAATGAACAACCTGACTCTTTACAAGGCTTAGCAGTCTTTGTCCATGATGCATGTTTTACGTGGTCTAGTAGTGATGAAGAAACATTAAATTTGGTGTTGAACCATGTCAGTCTAAGCTTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCTGGGAAATCATCGCTGTTATATTCAATTCTTGGAGAAACACGGCTTGCTCATGGATCAATTAACTCTGATAGATCAGTGGCATATGTACCACAGGTCCCGTGGATTTTATCTGGAACAATACGTGACAACATAATATTTGGGAAAAATTATGATCCCCAAAGGTATGCAGAAACTGTGAGAGCATGTGCTCTAGATGTCGATATCTCATTAATGGTTGGAGGAGACATGGCTTACATTGGGGAAAAGGGAGTTAACTTATCTGGTGGACAAAGAACTCGTCTTGCTTTAGCCAGGGCATTGTATCATGGCTGTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGATGGATCTTGCACAATGCCATTCTCGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTTTGTACTCATAATATTCAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGAAACATAAAGTGGGTGGGAAGTCCAAATGACCTCCAGGTCTCTTCATATATAACATTTTCCCCATTGAATGAACTTGATTCAGATGTACGGAATCAAGGAAAATCTTGCTGCACAAATTCTTCTTCCAAATTAAAAGAACTCTCAGATAGAGAAATTAAACATGTTGTGGAGGGTACTGAGGAGAACATCGAAGCTGAGTTGAGGAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTCATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGTTGTCATTTTGGGTTGATACAACAGAAAGCAGACAAACAAGATATTCTCTTTCCTTTTACCTGGCTATACTGGGTCTCTTTTGCATCATAAATTCTTTGCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAAGTGCACAACAGAATGCTTGGTGATCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCCTCAGATCTTTATACAATTGATGACTCTCTTCCGTTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTGTGTCATATGTTCAGGTTTTTTTCTTAATCCTGCTATTGCCATTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTAGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTCGATGGTTCATCAACTATTAGGGCATTCAAATCTGAGGACCTATTTTTTGCCAAGTTCACTGAACACGTGACATTGTATCAGAAGACTTCTTACACGGAGACAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTTATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGCTCATGGCAGTCTGCCAATCAACTTTGGCACTCCTGGGCTGGTAGGATTGGCACTCTCATATGCAGCTCCGATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTGTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGACGCCTAACCTTGAACCCTGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACTTTAAAATACAAGCCATCTTTGCCACCTGCACTATCCAATCTTAGTTTTACAATTGGTGGAGGGACACAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTCCGCCTTACCCCAATATGTACAGGCTCTATTTTCATTGATGGCATAAACATTAACGATATTCCTGTCAGAGAACTACGTGCTCGTTTAGCTGTTGTTCCTCAGAGTCCATTTCTGTTTGAAGGATCATTAAGGGATAATCTAGATCCATTCCGAATGCATGGTGACTTGAAAATTTGGAATGCCTTGGAGAAATGCCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGTTGCATATGCTCGTAAAGGAATCTGGGTCATCGTTTTCTGTTGGCCAAAGGCAACTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAGTGTACAGCCAATGTGGACACACAAACTGCTTCACTGCTGCAAAGTACCATATGTGATGAATGCAAGGGCATGACAGTAATTACAATTGCTCACCGGATCTCGACAGTTTTAAATATGGACAACATTTTAATCCTTGACCATGGGGACCTGGCTGAACAAGGAAATCCACAGGTTCTTATCAAACATGAATCCTTATTCTCCAGTTTTGCCAAAGCTTCATCAATGTGA 4317 0.4024 MALGFGLNAVTIVITVVIGFTNKSSRGIQRSDSQMALSKKLFFHLVPAVGACGSLLDMIFLWRREINRHFVGYHKWFYSCSELMVWTNIILFSRCVSSHYMLCNYVLCYWWILKPLFWIFHLLTKFPLLETPICVVESSILLLNITFGIAINVIRVKTLSSKNSSFEDPLLSNDMDLEEGSHCDPEEKTRNFCDLMTFKFINPVMNHGVVKQLDFDDLLQLPRDLDPSSCHDIILTCWQAQLRNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIRFLQQGTESFDGYLFAMSLGLTSVIKSFLDTQYSFHLSKLKLKLRSSIMTLIYHKCLRVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDMWSLPLQIGVALYLLYTQVKFAFLSGLAITILLIPVNKWISKLIADATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSDWLMETRSSELKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGYQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAVVSSRRLSRFLSCPENKSKVKEINSCSLPFHNEQPDSLQGLAVFVHDACFTWSSSDEETLNLVLNHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRLAHGSINSDRSVAYVPQVPWILSGTIRDNIIFGKNYDPQRYAETVRACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARALYHGCDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGNIKWVGSPNDLQVSSYITFSPLNELDSDVRNQGKSCCTNSSSKLKELSDREIKHVVEGTEENIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTTESRQTRYSLSFYLAILGLFCIINSLLTLVRAFSFAFGGLQAATKVHNRMLGDLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVVSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFAKFTEHVTLYQKTSYTETAASLWLSLRLQLLAAFIISFIALMAVVGAHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSVTETEKEMVSVERVLEYMDIPQEEIAGRLTLNPDWPNQGVIEFQNVTLKYKPSLPPALSNLSFTIGGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININDIPVRELRARLAVVPQSPFLFEGSLRDNLDPFRMHGDLKIWNALEKCHVKEEVEAAGGLHMLVKESGSSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTICDECKGMTVITIAHRISTVLNMDNILILDHGDLAEQGNPQVLIKHESLFSSFAKASSM 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci997g0003 1438 Pfam ABC transporter 1219 1366 IPR003439 GO:0005524
Prci997g0003 1438 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 188 1435 - -
Prci997g0003 1438 FunFam ATP-binding cassette subfamily C member 10 243 560 - -
Prci997g0003 1438 SUPERFAMILY ABC transporter transmembrane region 877 1184 IPR036640 GO:0005524|GO:0016020
Prci997g0003 1438 FunFam ATP-binding cassette (ABC) transporter, putative 1189 1435 - -
Prci997g0003 1438 Pfam ABC transporter transmembrane region 882 1129 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0003 1438 Pfam ABC transporter transmembrane region 267 531 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0003 1438 Gene3D - 1187 1433 IPR027417 -
Prci997g0003 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1196 1433 IPR027417 -
Prci997g0003 1438 Pfam ABC transporter 608 740 IPR003439 GO:0005524
Prci997g0003 1438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1202 1435 IPR003439 GO:0005524
Prci997g0003 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 586 803 IPR027417 -
Prci997g0003 1438 ProSitePatterns ABC transporters family signature. 1338 1352 IPR017871 GO:0005524|GO:0016887
Prci997g0003 1438 Gene3D ABC transporter type 1, transmembrane domain 240 561 IPR036640 GO:0005524|GO:0016020
Prci997g0003 1438 Gene3D ABC transporter type 1, transmembrane domain 846 1185 IPR036640 GO:0005524|GO:0016020
Prci997g0003 1438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 814 IPR003439 GO:0005524
Prci997g0003 1438 SUPERFAMILY ABC transporter transmembrane region 257 559 IPR036640 GO:0005524|GO:0016020
Prci997g0003 1438 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 881 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0003 1438 CDD ABCC_MRP_domain2 1200 1419 - -
Prci997g0003 1438 SMART AAA_5 617 791 IPR003593 GO:0016887
Prci997g0003 1438 SMART AAA_5 1228 1412 IPR003593 GO:0016887
Prci997g0003 1438 FunFam ABC transporter C family member 5 846 1185 - -
Prci997g0003 1438 CDD ABCC_MRP_domain1 589 790 - -
Prci997g0003 1438 CDD ABC_6TM_MRP7_D1_like 266 551 - -
Prci997g0003 1438 FunFam ABC transporter C family member 13 568 823 - -
Prci997g0003 1438 CDD ABC_6TM_MRP7_D2_like 880 1179 - -
Prci997g0003 1438 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 268 543 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0003 1438 Gene3D - 563 825 IPR027417 -
Prci997g0003 1438 ProSitePatterns ABC transporters family signature. 715 729 IPR017871 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci997g0003 579 836 Calmodulin-binding Proteins AT2G36910 28.000 4.23e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci997g0003 K05674 - gmx:100814181 2239.54